ENSG00000080608


Homo sapiens

Features
Gene ID: ENSG00000080608
  
Biological name :PUM3
  
Synonyms : PUM3 / pumilio RNA binding family member 3 / Q15397
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 9
Strand: -1
Band: p24.2
Gene start: 2720469
Gene end: 2844241
  
Corresponding Affymetrix probe sets: 1570529_at (Human Genome U133 Plus 2.0 Array)   203712_at (Human Genome U133 Plus 2.0 Array)   242580_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000380982
Ensembl peptide - ENSP00000474467
NCBI entrez gene - 9933     See in Manteia.
OMIM - 609960
RefSeq - NM_014878
RefSeq Peptide - NP_055693
swissprot - Q15397
swissprot - S4R3K8
Ensembl - ENSG00000080608
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pum3ENSDARG00000087779Danio rerio
 PUM3ENSGALG00000010178Gallus gallus
 Pum3ENSMUSG00000041360Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001313  Pumilio RNA-binding repeat
 IPR011989  Armadillo-like helical
 IPR012959  CPL domain
 IPR016024  Armadillo-type fold
 IPR033133  Pumilio homology domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006417 regulation of translation IBA
 biological_processGO:0010835 regulation of protein ADP-ribosylation IMP
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005694 chromosome IEA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0005783 endoplasmic reticulum IDA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003723 RNA binding HDA
 molecular_functionGO:0003729 mRNA binding IBA
 molecular_functionGO:0005488 binding IEA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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