ENSGALG00000010178


Gallus gallus

Features
Gene ID: ENSGALG00000010178
  
Biological name :PUM3
  
Synonyms : PUM3 / pumilio homolog 3
  
Possible biological names infered from orthology : pumilio RNA binding family member 3 / Q15397
  
Species: Gallus gallus
  
Chr. number: Z
Strand: -1
Band:
Gene start: 26629658
Gene end: 26654098
  
Corresponding Affymetrix probe sets: Gga.8109.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000016527
Ensembl peptide - ENSGALP00000044413
NCBI entrez gene - 427350     See in Manteia.
RefSeq - XM_015280101
RefSeq - XM_015280098
RefSeq - XM_015280099
RefSeq - XM_015280100
RefSeq - NM_001031437
RefSeq Peptide - NP_001026608
swissprot - E1C1R5
swissprot - A0A1D5NVN7
Ensembl - ENSGALG00000010178
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pum3ENSDARG00000087779Danio rerio
 PUM3ENSG00000080608Homo sapiens
 Pum3ENSMUSG00000041360Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001313  Pumilio RNA-binding repeat
 IPR011989  Armadillo-like helical
 IPR012959  CPL domain
 IPR016024  Armadillo-type fold
 IPR033133  Pumilio homology domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006417 regulation of translation IBA
 biological_processGO:0010835 regulation of protein ADP-ribosylation IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005694 chromosome IEA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0003729 mRNA binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr