ENSG00000087152


Homo sapiens

Features
Gene ID: ENSG00000087152
  
Biological name :ATXN7L3
  
Synonyms : ataxin 7 like 3 / ATXN7L3 / Q14CW9
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 17
Strand: -1
Band: q21.31
Gene start: 44191805
Gene end: 44200113
  
Corresponding Affymetrix probe sets: 224969_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000467153
Ensembl peptide - ENSP00000374035
Ensembl peptide - ENSP00000397259
Ensembl peptide - ENSP00000465210
Ensembl peptide - ENSP00000465614
Ensembl peptide - ENSP00000466717
Ensembl peptide - ENSP00000467092
NCBI entrez gene - 56970     See in Manteia.
RefSeq - XM_017024886
RefSeq - XM_011525044
RefSeq - XM_011525046
RefSeq - XM_017024880
RefSeq - XM_017024881
RefSeq - XM_017024882
RefSeq - XM_017024883
RefSeq - XM_017024884
RefSeq - XM_017024885
RefSeq - NM_001098833
RefSeq - NM_020218
RefSeq - XM_011525038
RefSeq Peptide - NP_001092303
RefSeq Peptide - NP_064603
swissprot - K7ENU1
swissprot - K7ENZ2
swissprot - K7EKG9
swissprot - K7EJK2
swissprot - Q14CW9
swissprot - K7EMZ3
Ensembl - ENSG00000087152
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 atxn7l3ENSDARG00000029331Danio rerio
 si:dkeyp-118b1.2ENSDARG00000079131Danio rerio
 A2AWT3ENSMUSG00000059995Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q96GX2 / ATXN7L3B / ataxin 7 like 3BENSG0000025371914


Protein motifs (from Interpro)
Interpro ID Name
 IPR010919  SAND-like domain superfamily
 IPR013243  SCA7 domain
 IPR013246  SAGA complex, Sgf11 subunit


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006325 chromatin organization IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0010390 histone monoubiquitination IDA
 biological_processGO:0016578 histone deubiquitination IDA
 biological_processGO:0045893 positive regulation of transcription, DNA-templated IDA
 cellular_componentGO:0000124 SAGA complex IDA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0071819 DUBm complex IDA
 molecular_functionGO:0003713 transcription coactivator activity IDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0030374 nuclear receptor transcription coactivator activity IDA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
HATs acetylate histones


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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