ENSG00000088881


Homo sapiens

Features
Gene ID: ENSG00000088881
  
Biological name :EBF4
  
Synonyms : early B cell factor 4 / EBF4 / Q9BQW3
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 20
Strand: 1
Band: p13
Gene start: 2692878
Gene end: 2760108
  
Corresponding Affymetrix probe sets: 233850_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000477107
Ensembl peptide - ENSP00000370022
Ensembl peptide - ENSP00000405003
Ensembl peptide - ENSP00000477023
Ensembl peptide - ENSP00000345030
NCBI entrez gene - 57593     See in Manteia.
OMIM - 609935
RefSeq - XM_017027985
RefSeq - NM_001110514
RefSeq - XM_006723600
RefSeq - XM_017027983
RefSeq - XM_017027984
RefSeq Peptide - NP_001103984
swissprot - V9GYU8
swissprot - X6R549
swissprot - E9PEI2
swissprot - A0A0A0MSW2
swissprot - Q9BQW3
Ensembl - ENSG00000088881
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Ebf4ENSMUSG00000053552Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
EBF1 / Q9UH73 / early B cell factor 1ENSG0000016433071
EBF3 / Q9H4W6 / early B cell factor 3ENSG0000010800169
EBF2 / Q9HAK2 / early B cell factor 2ENSG0000022181868


Protein motifs (from Interpro)
Interpro ID Name
 IPR002909  IPT domain
 IPR003523  Transcription factor COE
 IPR013783  Immunoglobulin-like fold
 IPR014756  Immunoglobulin E-set
 IPR018350  Transcription factor COE, conserved site
 IPR032200  Transcription factor COE, DNA-binding domain
 IPR032201  Transcription factor COE, helix-loop-helix domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0006366 transcription by RNA polymerase II IEA
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding IEA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding ISM
 molecular_functionGO:0001228 transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0008134 transcription factor binding IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0046983 protein dimerization activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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