ENSG00000100296


Homo sapiens

Features
Gene ID: ENSG00000100296
  
Biological name :THOC5
  
Synonyms : Q13769 / THOC5 / THO complex 5
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 22
Strand: -1
Band: q12.2
Gene start: 29505879
Gene end: 29555216
  
Corresponding Affymetrix probe sets: 209418_s_at (Human Genome U133 Plus 2.0 Array)   209419_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000415425
Ensembl peptide - ENSP00000413505
Ensembl peptide - ENSP00000416500
Ensembl peptide - ENSP00000444493
Ensembl peptide - ENSP00000420306
Ensembl peptide - ENSP00000416804
Ensembl peptide - ENSP00000380969
Ensembl peptide - ENSP00000380970
Ensembl peptide - ENSP00000380971
Ensembl peptide - ENSP00000388039
Ensembl peptide - ENSP00000393247
Ensembl peptide - ENSP00000393420
NCBI entrez gene - 8563     See in Manteia.
OMIM - 612733
RefSeq - XM_017029027
RefSeq - NM_001002877
RefSeq - NM_001002878
RefSeq - NM_001002879
RefSeq - NM_003678
RefSeq - XM_005261797
RefSeq - XM_005261798
RefSeq - XM_005261799
RefSeq - XM_005261801
RefSeq - XM_006724347
RefSeq Peptide - NP_003669
RefSeq Peptide - NP_001002877
RefSeq Peptide - NP_001002878
RefSeq Peptide - NP_001002879
swissprot - H7C441
swissprot - C9JXU6
swissprot - C9JXG5
swissprot - C9JCL9
swissprot - F5GZF3
swissprot - F8WCP5
swissprot - F8WES8
swissprot - Q13769
swissprot - A0A024R1D6
swissprot - H7C072
Ensembl - ENSG00000100296
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 thoc5ENSDARG00000038290Danio rerio
 THOC5ENSGALG00000029223Gallus gallus
 Thoc5ENSMUSG00000034274Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR019163  THO complex, subunit 5


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006369 termination of RNA polymerase II transcription TAS
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0006405 RNA export from nucleus TAS
 biological_processGO:0006406 mRNA export from nucleus TAS
 biological_processGO:0008380 RNA splicing IEA
 biological_processGO:0030154 cell differentiation IEA
 biological_processGO:0030224 monocyte differentiation IDA
 biological_processGO:0031124 mRNA 3"-end processing TAS
 biological_processGO:0032786 positive regulation of DNA-templated transcription, elongation IMP
 biological_processGO:0046784 viral mRNA export from host cell nucleus IDA
 biological_processGO:0051028 mRNA transport IEA
 biological_processGO:0060215 primitive hemopoiesis ISS
 biological_processGO:2000002 negative regulation of DNA damage checkpoint IMP
 cellular_componentGO:0000346 transcription export complex IDA
 cellular_componentGO:0000347 THO complex IDA
 cellular_componentGO:0000445 THO complex part of transcription export complex IDA
 cellular_componentGO:0000784 nuclear chromosome, telomeric region IDA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0003729 mRNA binding IBA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
Cleavage of Growing Transcript in the Termination Region
Transport of Mature mRNA derived from an Intron-Containing Transcript
mRNA 3-end processing


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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