ENSGALG00000029223


Gallus gallus

Features
Gene ID: ENSGALG00000029223
  
Biological name :THOC5
  
Synonyms : THOC5 / THO complex subunit 5 homolog
  
Possible biological names infered from orthology : Q13769 / THO complex 5
  
Species: Gallus gallus
  
Chr. number: 15
Strand: 1
Band:
Gene start: 11176347
Gene end: 11187885
  
Corresponding Affymetrix probe sets: GgaAffx.12981.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000057309
Ensembl peptide - ENSGALP00000064631
Ensembl peptide - ENSGALP00000061295
Ensembl peptide - ENSGALP00000057606
NCBI entrez gene - 417019     See in Manteia.
RefSeq - NM_001006195
RefSeq Peptide - NP_001006195
swissprot - A0A1L1S0H5
swissprot - A0A1L1RR57
swissprot - A0A1D5PXB2
swissprot - A0A1D5PWH6
Ensembl - ENSGALG00000029223
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 thoc5ENSDARG00000038290Danio rerio
 THOC5ENSG00000100296Homo sapiens
 Thoc5ENSMUSG00000034274Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR019163  THO complex, subunit 5


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006406 mRNA export from nucleus IEA
 biological_processGO:0030224 monocyte differentiation IEA
 biological_processGO:0032786 positive regulation of DNA-templated transcription, elongation IEA
 biological_processGO:0046784 viral mRNA export from host cell nucleus IEA
 biological_processGO:2000002 negative regulation of DNA damage checkpoint IEA
 cellular_componentGO:0000346 transcription export complex IEA
 cellular_componentGO:0000347 THO complex IEA
 cellular_componentGO:0000445 THO complex part of transcription export complex IEA
 cellular_componentGO:0000784 nuclear chromosome, telomeric region IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA


Pathways (from Reactome)
Pathway description
Cleavage of Growing Transcript in the Termination Region
mRNA 3-end processing


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr