ENSG00000100319


Homo sapiens

Features
Gene ID: ENSG00000100319
  
Biological name :ZMAT5
  
Synonyms : Q9UDW3 / zinc finger matrin-type 5 / ZMAT5
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 22
Strand: -1
Band: q12.2
Gene start: 29730956
Gene end: 29767011
  
Corresponding Affymetrix probe sets: 218752_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000344241
NCBI entrez gene - 55954     See in Manteia.
RefSeq - NM_001318129
RefSeq - NM_019103
RefSeq - NM_001003692
RefSeq Peptide - NP_001003692
RefSeq Peptide - NP_001305058
RefSeq Peptide - NP_061976
swissprot - A0A024R1I1
swissprot - Q9UDW3
Ensembl - ENSG00000100319
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 zmat5ENSDARG00000035434Danio rerio
 ZMAT5ENSGALG00000008070Gallus gallus
 Zmat5ENSMUSG00000009076Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000571  Zinc finger, CCCH-type
 IPR013085  U1-C, C2H2-type zinc finger
 IPR036236  Zinc finger C2H2 superfamily
 IPR036855  Zinc finger, CCCH-type superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000398 mRNA splicing, via spliceosome TAS
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0008380 RNA splicing IC
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0005681 spliceosomal complex IEA
 cellular_componentGO:0005689 U12-type spliceosomal complex IDA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
mRNA Splicing - Minor Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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