ENSGALG00000008070


Gallus gallus

Features
Gene ID: ENSGALG00000008070
  
Biological name :ZMAT5
  
Synonyms : zinc finger matrin-type 5 / ZMAT5
  
Possible biological names infered from orthology : Q9CQR5 / Q9UDW3
  
Species: Gallus gallus
  
Chr. number: 15
Strand: 1
Band:
Gene start: 11094808
Gene end: 11107741
  
Corresponding Affymetrix probe sets: Gga.10562.1.S1_at (Chicken Array)   Gga.12213.1.S1_s_at (Chicken Array)   Gga.18037.1.A1_at (Chicken Array)   Gga.18037.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000013088
Ensembl peptide - ENSGALP00000054056
NCBI entrez gene - 417017     See in Manteia.
RefSeq - XM_015294847
RefSeq - NM_001277514
RefSeq - XM_015294844
RefSeq - XM_015294845
RefSeq - XM_015294846
RefSeq - NM_001277513
RefSeq Peptide - NP_001264443
RefSeq Peptide - NP_001264442
swissprot - E1C1J3
swissprot - A0A1D5PMH8
Ensembl - ENSGALG00000008070
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 zmat5ENSDARG00000035434Danio rerio
 ZMAT5ENSG00000100319Homo sapiens
 Zmat5ENSMUSG00000009076Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000571  Zinc finger, CCCH-type
 IPR013085  U1-C, C2H2-type zinc finger


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005689 U12-type spliceosomal complex IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
mRNA Splicing - Minor Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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