ENSMUSG00000009076


Mus musculus

Features
Gene ID: ENSMUSG00000009076
  
Biological name :Zmat5
  
Synonyms : Q9CQR5 / zinc finger, matrin type 5 / Zmat5
  
Possible biological names infered from orthology : Q9UDW3
  
Species: Mus musculus
  
Chr. number: 11
Strand: 1
Band: A1
Gene start: 4704678
Gene end: 4737669
  
Corresponding Affymetrix probe sets: 10373944 (MoGene1.0st)   1419366_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000009220
NCBI entrez gene - 67178     See in Manteia.
MGI - MGI:1914428
RefSeq - NM_026015
RefSeq - XM_006514787
RefSeq - NM_001356390
RefSeq - NM_001356391
RefSeq - XM_006514786
RefSeq Peptide - NP_080291
RefSeq Peptide - NP_001343319
RefSeq Peptide - NP_001343320
swissprot - Q9CQR5
Ensembl - ENSMUSG00000009076
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 zmat5ENSDARG00000035434Danio rerio
 ZMAT5ENSGALG00000008070Gallus gallus
 ZMAT5ENSG00000100319Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000571  Zinc finger, CCCH-type
 IPR013085  U1-C, C2H2-type zinc finger
 IPR036236  Zinc finger C2H2 superfamily
 IPR036855  Zinc finger, CCCH-type superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0008150 biological_process ND
 biological_processGO:0008380 RNA splicing IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005681 spliceosomal complex IEA
 cellular_componentGO:0005689 U12-type spliceosomal complex IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
mRNA Splicing - Minor Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr