ENSG00000100503


Homo sapiens

Features
Gene ID: ENSG00000100503
  
Biological name :NIN
  
Synonyms : NIN / ninein / Q8N4C6
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 14
Strand: -1
Band: q22.1
Gene start: 50719763
Gene end: 50831121
  
Corresponding Affymetrix probe sets: 219285_s_at (Human Genome U133 Plus 2.0 Array)   223981_at (Human Genome U133 Plus 2.0 Array)   224303_x_at (Human Genome U133 Plus 2.0 Array)   224304_x_at (Human Genome U133 Plus 2.0 Array)   225921_at (Human Genome U133 Plus 2.0 Array)   234299_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000431485
Ensembl peptide - ENSP00000473530
Ensembl peptide - ENSP00000436092
Ensembl peptide - ENSP00000433717
Ensembl peptide - ENSP00000432924
Ensembl peptide - ENSP00000431826
Ensembl peptide - ENSP00000245441
Ensembl peptide - ENSP00000324210
Ensembl peptide - ENSP00000371472
Ensembl peptide - ENSP00000371474
Ensembl peptide - ENSP00000374519
Ensembl peptide - ENSP00000398641
Ensembl peptide - ENSP00000412391
NCBI entrez gene - 51199     See in Manteia.
OMIM - 608684
RefSeq - XM_011536823
RefSeq - NM_016350
RefSeq - NM_020921
RefSeq - NM_182944
RefSeq - NM_182946
RefSeq - XM_011536817
RefSeq - XM_011536819
RefSeq - XM_011536822
RefSeq Peptide - NP_057434
RefSeq Peptide - NP_065972
RefSeq Peptide - NP_891989
RefSeq Peptide - NP_891991
swissprot - A0A0B4J215
swissprot - E9PJH9
swissprot - H0YDJ4
swissprot - H7C162
swissprot - H9KV85
swissprot - C9J066
swissprot - R4GN85
swissprot - E9PN67
swissprot - Q8N4C6
Ensembl - ENSG00000100503
  
Related genetic diseases (OMIM): 614851 - ?Seckel syndrome 7, 614851
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ninENSDARG00000060298Danio rerio
 NINENSGALG00000012361Gallus gallus
 NinENSMUSG00000021068Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
NINL / Q9Y2I6 / ninein likeENSG0000010100418


Protein motifs (from Interpro)
Interpro ID Name
 IPR002048  EF-hand domain
 IPR011992  EF-hand domain pair
 IPR029664  Ninein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008104 protein localization IMP
 biological_processGO:0010457 centriole-centriole cohesion IMP
 biological_processGO:0034454 microtubule anchoring at centrosome IMP
 biological_processGO:0051642 centrosome localization TAS
 biological_processGO:0090222 centrosome-templated microtubule nucleation IBA
 cellular_componentGO:0000242 pericentriolar material IDA
 cellular_componentGO:0000922 spindle pole IMP
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005730 nucleolus IDA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005813 centrosome IDA
 cellular_componentGO:0005814 centriole IEA
 cellular_componentGO:0005815 microtubule organizing center IEA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0005874 microtubule IEA
 cellular_componentGO:0036449 microtubule minus-end IBA
 cellular_componentGO:0072686 mitotic spindle IDA
 cellular_componentGO:0097431 mitotic spindle pole IBA
 cellular_componentGO:0097539 ciliary transition fiber IBA
 cellular_componentGO:0120103 centriolar subdistal appendage IDA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0005525 GTP binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000013 Hypoplastic uterus 
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 HP:0000252 Microcephaly "Microcephaly is a neurodevelopmental disorder in which the circumference of the head is more than two standard deviations smaller than the age- and gender-dependent norm." [HPO:curators]
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 HP:0000448 Prominent nose 
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 HP:0000601 Hypotelorism 
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 HP:0000786 Primary amenorrhea 
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 HP:0001191 Abnormality of the carpal bones "An abnormality affecting the carpal bones of the wrist (scaphoid, lunate, triquetral, pisiform, trapezium, trapezoid, capitate, hamate)." [HPO:curators]
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001385 Hip dysplasia 
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 HP:0001511 Intrauterine growth retardation 
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 HP:0002750 Delayed skeletal maturation "A decreased rate of skeletal maturation. Delayed skeletal maturation can be diagnosed on the basis of an estimation of the bone age from radiographs of specific bones in the human body." [HPO:curators]
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 HP:0003067 Madelung deformity 
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 HP:0003510 Short stature, severe "A severe degree of short stature." [HPO:curators]
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 HP:0004626 Lumbar scoliosis 
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 HP:0008551 Underdeveloped ears 
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 HP:0010864 Mental retardation, severe "Moderate mental retardation is defined as an intelligence quotient (IQ) in the range of 20-34." [HPO:probinson]
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 HP:0011344 Severe global developmental delay "A severe delay in the achievement of motor or mental milestones in the domains of development of a child." [DDD:hvfirth]
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 HP:0011787 Central hypothyroidism "A type of hypothyroidism due to an insufficient stimulation of an otherwise normal thyroid gland. Central hypothyroidism is caused by either pituitary (secondary hypothyroidism) or hypothalamic (tertiary hypothyroidism) defects." [DDD:spark, pmid:18415684]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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