ENSDARG00000060298


Danio rerio

Features
Gene ID: ENSDARG00000060298
  
Biological name :nin
  
Synonyms : nin / ninein (GSK3B interacting protein)
  
Possible biological names infered from orthology : ninein / Q61043 / Q8N4C6
  
Species: Danio rerio
  
Chr. number: 13
Strand: -1
Band:
Gene start: 36800334
Gene end: 36844945
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000125949
Ensembl peptide - ENSDARP00000111221
NCBI entrez gene - 571879     See in Manteia.
RefSeq - XM_009307508
RefSeq - XM_017358842
swissprot - I3ISQ9
swissprot - F1QE08
ZFIN ID - ZDB-GENE-070725-1
Ensembl - ENSDARG00000060298
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 NINENSGALG00000012361Gallus gallus
 NINENSG00000100503Homo sapiens
 NinENSMUSG00000021068Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ninl / ninein-like / Q9Y2I6*ENSDARG0000009841414


Protein motifs (from Interpro)
Interpro ID Name
 IPR002048  EF-hand domain
 IPR011992  EF-hand domain pair
 IPR029664  Ninein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001841 neural tube formation IMP
 biological_processGO:0030917 midbrain-hindbrain boundary development IMP
 biological_processGO:0034454 microtubule anchoring at centrosome IEA
 biological_processGO:0051642 centrosome localization IBA
 biological_processGO:0090222 centrosome-templated microtubule nucleation IBA
 cellular_componentGO:0000242 pericentriolar material IBA
 cellular_componentGO:0005813 centrosome IEA
 cellular_componentGO:0005814 centriole IBA
 cellular_componentGO:0036449 microtubule minus-end IBA
 cellular_componentGO:0097431 mitotic spindle pole IBA
 cellular_componentGO:0097539 ciliary transition fiber IBA
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000042 midbrain hindbrain boundary midbrain hindbrain boundary deformed , abnormal
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 ZFA:0000107 eye eye decreased size , abnormal
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 ZFA:0000737 cranium cranium decreased size , abnormal
cranium deformed , abnormal
Show

 ZFA:0001120 neuroectoderm neuroectoderm deformed , abnormal
Show

 ZFA:0001617 otolith otolith decreased size , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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