ENSG00000100941


Homo sapiens

Features
Gene ID: ENSG00000100941
  
Biological name :PNN
  
Synonyms : pinin, desmosome associated protein / PNN / Q9H307
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 14
Strand: 1
Band: q21.1
Gene start: 39175183
Gene end: 39183218
  
Corresponding Affymetrix probe sets: 1567213_at (Human Genome U133 Plus 2.0 Array)   1567214_a_at (Human Genome U133 Plus 2.0 Array)   212036_s_at (Human Genome U133 Plus 2.0 Array)   212037_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000452217
Ensembl peptide - ENSP00000452318
Ensembl peptide - ENSP00000216832
NCBI entrez gene - 5411     See in Manteia.
OMIM - 603154
RefSeq - NM_002687
RefSeq Peptide - NP_002678
swissprot - Q9H307
swissprot - G3V579
swissprot - G3V5F0
Ensembl - ENSG00000100941
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pnnENSDARG00000015851Danio rerio
 PNNENSGALG00000010167Gallus gallus
 PnnENSMUSG00000020994Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR006786  Pinin/SDK/MemA protein
 IPR006787  Pinin/SDK


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000398 mRNA splicing, via spliceosome IC
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0007155 cell adhesion TAS
 biological_processGO:0008380 RNA splicing IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005681 spliceosomal complex IEA
 cellular_componentGO:0005882 intermediate filament TAS
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0005911 cell-cell junction TAS
 cellular_componentGO:0016020 membrane HDA
 cellular_componentGO:0016607 nuclear speck IDA
 cellular_componentGO:0030054 cell junction IEA
 cellular_componentGO:0030057 desmosome IEA
 cellular_componentGO:0035145 exon-exon junction complex IDA
 cellular_componentGO:0071013 catalytic step 2 spliceosome IDA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003723 RNA binding HDA
 molecular_functionGO:0005198 structural molecule activity NAS
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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