ENSG00000101361


Homo sapiens

Features
Gene ID: ENSG00000101361
  
Biological name :NOP56
  
Synonyms : NOP56 / NOP56 ribonucleoprotein / O00567
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 20
Strand: 1
Band: p13
Gene start: 2652145
Gene end: 2658393
  
Corresponding Affymetrix probe sets: 200874_s_at (Human Genome U133 Plus 2.0 Array)   200875_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000370589
Ensembl peptide - ENSP00000388497
Ensembl peptide - ENSP00000403199
Ensembl peptide - ENSP00000434317
NCBI entrez gene - 10528     See in Manteia.
OMIM - 614154
RefSeq - NM_006392
RefSeq Peptide - NP_006383
swissprot - Q5JXT2
swissprot - H0Y653
swissprot - H0YDU4
swissprot - O00567
Ensembl - ENSG00000101361
  
Related genetic diseases (OMIM): 614153 - Spinocerebellar ataxia 36, 614153
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 nop56ENSDARG00000012820Danio rerio
 Nop56ENSMUSG00000027405Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002687  Nop domain
 IPR012974  NOP5, N-terminal
 IPR012976  NOSIC
 IPR036070  Nop domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000154 rRNA modification IBA
 biological_processGO:0006364 rRNA processing TAS
 biological_processGO:0042254 ribosome biogenesis IEA
 cellular_componentGO:0001650 fibrillar center IDA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0005730 nucleolus TAS
 cellular_componentGO:0005732 small nucleolar ribonucleoprotein complex IDA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0016020 membrane HDA
 cellular_componentGO:0031428 box C/D snoRNP complex NAS
 cellular_componentGO:0032040 small-subunit processome IBA
 cellular_componentGO:0070761 pre-snoRNP complex IDA
 molecular_functionGO:0003723 RNA binding TAS
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0030515 snoRNA binding IDA
 molecular_functionGO:0045296 cadherin binding IDA
 molecular_functionGO:1990226 histone methyltransferase binding IPI


Pathways (from Reactome)
Pathway description
Association of TriC/CCT with target proteins during biosynthesis
rRNA modification in the nucleus and cytosol
Major pathway of rRNA processing in the nucleolus and cytosol


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000365 Hearing loss 
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 HP:0000508 Ptosis "Drooping of the eyelid." [HPO:curators]
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 HP:0000514 Slow saccades 
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 HP:0000622 Blurred vision 
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 HP:0000651 Diplopia "Diplopia is a condition in which a single object is perceived as two images, it is also known as double vision." [HPO:curators]
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 HP:0001260 Dysarthria "Dysarthric speech is a general description referring to a neurological speech disorder characterized by poor articulation. Depending on the involved neurological structures, dysarthria may be further classified as spastic, flaccid, ataxic, hyperkinetic and hypokinetic, or mixed." [HPO:curators]
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 HP:0001272 Cerebellar atrophy 
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 HP:0001308 Tongue fasciculations 
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 HP:0001310 Dysmetria 
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 HP:0001347 Hyperreflexia "The presence of overactive or overresponsive reflexes." [HPO:curators]
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 HP:0002015 Dysphagia "Difficulty in swallowing." [HPO:curators]
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 HP:0002066 Gait ataxia "Impairment of the ability to coordinate the movements required for normal walking." [HPO:curators]
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 HP:0002070 Limb ataxia 
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 HP:0002076 Migraine 
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 HP:0002078 Truncal ataxia 
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 HP:0002080 Intention tremor "An oscillatory cerebellar ataxia that tends to be absent when the limbs are inactive and during the first part of voluntary movement but worsening as the movement continues and greater precision is required (e.g., in touching a target such as the patient s nose or a physician s finger)." [HPO:curators]
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 HP:0002311 Incoordination 
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 HP:0002321 Vertigo "An abnormal sensation of spinning while the body is actually stationary." [HPO:curators]
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 HP:0002346 Head tremor 
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 HP:0002355 Difficulty walking 
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 HP:0002378 Hand tremor 
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 HP:0002607 Bowel incontinence 
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 HP:0003202 Amyotrophy "The presence of muscular atrophy (which is also known as amyotrophy)." [HPO:curators]
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 HP:0003487 Babinski sign "Upturning of the big toe (and sometimes fanning of the other toes) in response to stimulation of the sole of the foot. If the Babinski sign is present it can indicate damage to the corticospinal tract." [HPO:curators]
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 HP:0003676 Progressive disorder 
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 HP:0007001 Loss of purkinje cells in the cerebellar vermis 
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 HP:0007018 Attention deficit hyperactivity disorder "Attention deficit hyperactivity disorder (ADHD) manifests at age 2-3 years or by first grade at the latest. The main symptoms are distractibility, impulsivity, hyperactivity, and often trouble organizing tasks and projects, difficulty going to sleep, and social problems from being aggressive, loud, or impatient." [HPO:curators]
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 HP:0007772 Impaired smooth pursuit in adult patients 
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 HP:0012473 Tongue atrophy "Wasting of the `tongue` (FMA:54640)." [ORCID:0000-0001-5208-3432]
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 HP:0045084 Limb myoclonus 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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