ENSG00000104327


Homo sapiens

Features
Gene ID: ENSG00000104327
  
Biological name :CALB1
  
Synonyms : CALB1 / calbindin 1 / P05937
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 8
Strand: -1
Band: q21.3
Gene start: 90058608
Gene end: 90095475
  
Corresponding Affymetrix probe sets: 205625_s_at (Human Genome U133 Plus 2.0 Array)   205626_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000429602
Ensembl peptide - ENSP00000430281
Ensembl peptide - ENSP00000430192
Ensembl peptide - ENSP00000265431
Ensembl peptide - ENSP00000429246
NCBI entrez gene - 793     See in Manteia.
OMIM - 114050
RefSeq - NM_004929
RefSeq Peptide - NP_004920
swissprot - E5RIZ8
swissprot - E5RG14
swissprot - P05937
Ensembl - ENSG00000104327
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 calb1ENSDARG00000031598Danio rerio
 CALB1ENSGALG00000032282Gallus gallus
 Calb1ENSMUSG00000028222Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CALB2 / P22676 / calbindin 2ENSG0000017213757
SCGN / O76038 / secretagogin, EF-hand calcium binding proteinENSG0000007968937


Protein motifs (from Interpro)
Interpro ID Name
 IPR002048  EF-hand domain
 IPR011992  EF-hand domain pair
 IPR018247  EF-Hand 1, calcium-binding site
 IPR029634  Calbindin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007611 learning or memory IEA
 biological_processGO:0007614 short-term memory IMP
 biological_processGO:0007616 long-term memory IMP
 biological_processGO:0007626 locomotory behavior IEA
 biological_processGO:0010842 retina layer formation IEA
 biological_processGO:0035502 metanephric part of ureteric bud development IEA
 biological_processGO:0044267 cellular protein metabolic process TAS
 biological_processGO:0048167 regulation of synaptic plasticity IEA
 biological_processGO:0051480 regulation of cytosolic calcium ion concentration IBA
 biological_processGO:0055074 calcium ion homeostasis IEA
 biological_processGO:0060041 retina development in camera-type eye IEA
 biological_processGO:0071310 cellular response to organic substance IEA
 biological_processGO:0072205 metanephric collecting duct development IEA
 biological_processGO:0072221 metanephric distal convoluted tubule development IEA
 biological_processGO:0072286 metanephric connecting tubule development IEA
 biological_processGO:0099509 regulation of presynaptic cytosolic calcium ion concentration IEA
 biological_processGO:1900271 regulation of long-term synaptic potentiation IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IBA
 cellular_componentGO:0030424 axon ISS
 cellular_componentGO:0030425 dendrite IDA
 cellular_componentGO:0043005 neuron projection IEA
 cellular_componentGO:0043025 neuronal cell body IDA
 cellular_componentGO:0043195 terminal bouton IEA
 cellular_componentGO:0043197 dendritic spine IEA
 cellular_componentGO:0044297 cell body IEA
 cellular_componentGO:0045202 synapse IBA
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0005499 vitamin D binding IEA
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008270 zinc ion binding IMP
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Amyloid fiber formation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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