ENSG00000104419


Homo sapiens

Features
Gene ID: ENSG00000104419
  
Biological name :NDRG1
  
Synonyms : NDRG1 / N-myc downstream regulated 1 / Q92597
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 8
Strand: -1
Band: q24.22
Gene start: 133237171
Gene end: 133302022
  
Corresponding Affymetrix probe sets: 200632_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000428384
Ensembl peptide - ENSP00000428345
Ensembl peptide - ENSP00000428802
Ensembl peptide - ENSP00000437443
Ensembl peptide - ENSP00000431057
Ensembl peptide - ENSP00000430171
Ensembl peptide - ENSP00000429994
Ensembl peptide - ENSP00000429840
Ensembl peptide - ENSP00000429524
Ensembl peptide - ENSP00000429380
Ensembl peptide - ENSP00000429272
Ensembl peptide - ENSP00000429172
Ensembl peptide - ENSP00000429007
Ensembl peptide - ENSP00000428991
Ensembl peptide - ENSP00000319977
Ensembl peptide - ENSP00000404854
Ensembl peptide - ENSP00000427894
NCBI entrez gene - 10397     See in Manteia.
OMIM - 605262
RefSeq - NM_001135242
RefSeq - NM_001258432
RefSeq - NM_001258433
RefSeq - NM_006096
RefSeq - XM_011516791
RefSeq - XM_011516792
RefSeq Peptide - NP_001245362
RefSeq Peptide - NP_001128714
RefSeq Peptide - NP_001245361
RefSeq Peptide - NP_006087
swissprot - E5RGM5
swissprot - E5RGG6
swissprot - E5RG99
swissprot - Q92597
swissprot - E7ESM1
swissprot - E5RK17
swissprot - E5RJY1
swissprot - E5RJ98
swissprot - E5RIR1
swissprot - E5RIV1
swissprot - E5RIM2
swissprot - E5RI76
swissprot - E5RH82
Ensembl - ENSG00000104419
  
Related genetic diseases (OMIM): 601455 - Charcot-Marie-Tooth disease, type 4D, 601455
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ndrg1aENSDARG00000032849Danio rerio
 ndrg1bENSDARG00000010420Danio rerio
 NDRG1ENSGALG00000035397Gallus gallus
 Ndrg1ENSMUSG00000005125Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
NDRG3 / Q9UGV2 / NDRG family member 3ENSG0000010107962
NDRG4 / Q9ULP0 / NDRG family member 4ENSG0000010303456
NDRG2 / Q9UN36 / NDRG family member 2ENSG0000016579552


Protein motifs (from Interpro)
Interpro ID Name
 IPR004142  NDRG
 IPR029058  Alpha/Beta hydrolase fold
 IPR030693  Protein NDRG1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008285 negative regulation of cell proliferation IEA
 biological_processGO:0010038 response to metal ion TAS
 biological_processGO:0030330 DNA damage response, signal transduction by p53 class mediator IEP
 biological_processGO:0032287 peripheral nervous system myelin maintenance IEA
 biological_processGO:0042127 regulation of cell proliferation IEA
 biological_processGO:0042981 regulation of apoptotic process TAS
 biological_processGO:0045576 mast cell activation IEA
 biological_processGO:0071456 cellular response to hypoxia IEP
 biological_processGO:0090232 positive regulation of spindle checkpoint IDA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005813 centrosome IDA
 cellular_componentGO:0005815 microtubule organizing center IEA
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0005874 microtubule IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005913 cell-cell adherens junction IDA
 cellular_componentGO:0015630 microtubule cytoskeleton IDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0043209 myelin sheath IEA
 cellular_componentGO:0048471 perinuclear region of cytoplasm IDA
 cellular_componentGO:0055038 recycling endosome membrane IDA
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008017 microtubule binding IDA
 molecular_functionGO:0017137 Rab GTPase binding IDA
 molecular_functionGO:0043015 gamma-tubulin binding IDA
 molecular_functionGO:0045296 cadherin binding IDA


Pathways (from Reactome)
Pathway description
TP53 regulates transcription of several additional cell death genes whose specific roles in p53-dependent apoptosis remain uncertain


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000365 Hearing loss 
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 HP:0000649 Abnormality of vision evoked potentials 
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 HP:0000762 Decreased nerve conduction velocities 
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 HP:0001155 Abnormality of the hand "An abnormality affecting one or both hands." [HPO:curators]
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 HP:0001265 Hyporeflexia 
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 HP:0001284 Areflexia 
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 HP:0001288 Gait disturbance "The term gait disturbance can refer to any disruption of the ability to walk. In general, this can refer to neurological diseases but also fractures or other sources of pain that is triggered upon walking. However, in the current context gait disturbance refers to difficulty walking on the basis of a neurological or muscular disease." [HPO:curators]
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 HP:0002460 Distal muscle weakness "Reduced strength of the distal musculature." [HPO:curators]
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 HP:0002936 Distal sensory impairment 
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 HP:0003383 Onion bulb formations on nerve biopsy 
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 HP:0003447 Axonal loss 
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 HP:0003481 Segmental demyelination/remyelination 
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 HP:0003621 Juvenile onset 
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 HP:0003693 Distal amyotrophy "Muscular atrophy affecting muscles in the distal portions of the extremities." [HPO:curators]
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 HP:0004696 talipes cavus equinovarus 
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 HP:0006916 Intraaxonal accumulation of curvilinear profiles 
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 HP:0006958 Abnormal auditory evoked potentials "An abnormality of the auditory evoked potentials, which are used to trace the signal generated by a sound, from the cochlear nerve, through the lateral lemniscus, to the medial geniculate nucleus, and to the cortex." [HPO:curators]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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