ENSDARG00000010420


Danio rerio

Features
Gene ID: ENSDARG00000010420
  
Biological name :ndrg1b
  
Synonyms : ndrg1b / N-myc downstream regulated 1b
  
Possible biological names infered from orthology : NDRG1 / N-myc downstream regulated 1 / Protein NDRG1 / Q62433 / Q92597
  
Species: Danio rerio
  
Chr. number: 16
Strand: 1
Band:
Gene start: 31511739
Gene end: 31517227
  
Corresponding Affymetrix probe sets: Dr.8090.1.A1_at (Zebrafish Array)   NM_200692_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000049419
NCBI entrez gene - 393665     See in Manteia.
RefSeq - NM_200692
RefSeq Peptide - NP_956986
swissprot - F1R8D1
ZFIN ID - ZDB-GENE-040426-1648
Ensembl - ENSDARG00000010420
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 NDRG1ENSGALG00000035397Gallus gallus
 NDRG1ENSG00000104419Homo sapiens
 Ndrg1ENSMUSG00000005125Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ndrg1a / N-myc downstream regulated 1a / NDRG1* / Q62433* / Q92597* / Protein NDRG1 * / N-myc downstream regulated 1*ENSDARG0000003284967
ndrg3b / ndrg family member 3b / NDRG3* / Q9UGV2* / Q9QYF9* / NDRG family member 3* / Mus musculus N-myc downstream regulated 3 (Ndrg3), transcript variant 6, mRNA.*ENSDARG0000001005257
ndrg3a / ndrg family member 3a / NDRG3* / Q9UGV2* / Q9QYF9* / NDRG family member 3* / Mus musculus N-myc downstream regulated 3 (Ndrg3), transcript variant 6, mRNA.*ENSDARG0000001308756
ndrg4 / NDRG family member 4 / Q8BTG7* / Q9ULP0* / Protein NDRG4 *ENSDARG0000010393752
ndrg2 / Q5PR98 / NDRG family member 2 / Q9UN36* / Q9QYG0* / Protein NDRG2 Protein NDRG2, N-terminally processed*ENSDARG0000001117046


Protein motifs (from Interpro)
Interpro ID Name
 IPR004142  NDRG
 IPR029058  Alpha/Beta hydrolase fold
 IPR030693  Protein NDRG1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007165 signal transduction IBA
 biological_processGO:0032287 peripheral nervous system myelin maintenance IEA
 biological_processGO:0042127 regulation of cell proliferation IEA
 biological_processGO:0045576 mast cell activation IEA
 biological_processGO:0045580 regulation of T cell differentiation IGI
 biological_processGO:0048538 thymus development IMP
 cellular_componentGO:0005737 cytoplasm IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0001078 thymus thymus decreased size , abnormal
thymus decreased distribution , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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