ENSG00000107518


Homo sapiens

Features
Gene ID: ENSG00000107518
  
Biological name :ATRNL1
  
Synonyms : ATRNL1 / attractin like 1 / Q5VV63
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 10
Strand: 1
Band: q25.3
Gene start: 115093365
Gene end: 115948992
  
Corresponding Affymetrix probe sets: 1569796_s_at (Human Genome U133 Plus 2.0 Array)   213744_at (Human Genome U133 Plus 2.0 Array)   213745_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000473412
Ensembl peptide - ENSP00000434118
Ensembl peptide - ENSP00000476902
Ensembl peptide - ENSP00000483722
Ensembl peptide - ENSP00000347152
Ensembl peptide - ENSP00000431423
NCBI entrez gene - 26033     See in Manteia.
OMIM - 612869
RefSeq - XM_017016039
RefSeq - XM_011539589
RefSeq - XM_011539590
RefSeq - XM_011539591
RefSeq - XM_017016035
RefSeq - XM_017016036
RefSeq - XM_017016037
RefSeq - XM_017016038
RefSeq - NM_001276282
RefSeq - NM_207303
RefSeq - XM_011539587
RefSeq - XM_011539588
RefSeq Peptide - NP_997186
RefSeq Peptide - NP_001263211
swissprot - R4GMZ1
swissprot - E9PL90
swissprot - Q5VV63
swissprot - A0A087X0X7
swissprot - H0YDQ9
Ensembl - ENSG00000107518
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 atrnl1aENSDARG00000077188Danio rerio
 atrnl1bENSDARG00000006420Danio rerio
 ATRNL1ENSGALG00000009152Gallus gallus
 Atrnl1ENSMUSG00000054843Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ATRN / O75882 / attractinENSG0000008881260
MEGF8 / Q7Z7M0 / multiple EGF like domains 8ENSG0000010542924


Protein motifs (from Interpro)
Interpro ID Name
 IPR000742  EGF-like domain
 IPR000859  CUB domain
 IPR001304  C-type lectin-like
 IPR002049  Laminin EGF domain
 IPR002165  Plexin repeat
 IPR006652  Kelch repeat type 1
 IPR013032  EGF-like, conserved site
 IPR013111  EGF-like domain, extracellular
 IPR015915  Kelch-type beta propeller
 IPR016186  C-type lectin-like/link domain superfamily
 IPR016187  C-type lectin fold
 IPR016201  PSI domain
 IPR034011  Attractin-like, C-type lectin-like domain
 IPR035914  Spermadhesin, CUB domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007186 G-protein coupled receptor signaling pathway IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0030246 carbohydrate binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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