ENSG00000107625


Homo sapiens

Features
Gene ID: ENSG00000107625
  
Biological name :DDX50
  
Synonyms : DDX50 / DExD-box helicase 50 / Q9BQ39
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 10
Strand: 1
Band: q22.1
Gene start: 68901278
Gene end: 68946847
  
Corresponding Affymetrix probe sets: 1568814_at (Human Genome U133 Plus 2.0 Array)   1568815_a_at (Human Genome U133 Plus 2.0 Array)   221699_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000479336
Ensembl peptide - ENSP00000362687
Ensembl peptide - ENSP00000474314
Ensembl peptide - ENSP00000474785
NCBI entrez gene - 79009     See in Manteia.
OMIM - 610373
RefSeq - XM_017016630
RefSeq - NM_024045
RefSeq - XM_011540144
RefSeq - XM_017016626
RefSeq - XM_017016627
RefSeq - XM_017016628
RefSeq - XM_017016629
RefSeq - XM_005270148
RefSeq Peptide - NP_076950
swissprot - Q9BQ39
swissprot - S4R3G6
swissprot - S4R3V4
swissprot - A0A087WVC1
Ensembl - ENSG00000107625
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Ddx50ENSMUSG00000020076Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
DDX21 / Q9NR30 / DExD-box helicase 21ENSG0000016573259


Protein motifs (from Interpro)
Interpro ID Name
 IPR001650  Helicase, C-terminal
 IPR011545  DEAD/DEAH box helicase domain
 IPR012562  GUCT
 IPR014001  Helicase superfamily 1/2, ATP-binding domain
 IPR014014  RNA helicase, DEAD-box type, Q motif
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR035979  RNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0010501 RNA secondary structure unwinding IBA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005730 nucleolus IDA
 cellular_componentGO:0005737 cytoplasm IBA
 cellular_componentGO:0005886 plasma membrane IDA
 cellular_componentGO:0016020 membrane HDA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0004004 ATP-dependent RNA helicase activity IBA
 molecular_functionGO:0004386 helicase activity IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016787 hydrolase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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