ENSG00000108395


Homo sapiens

Features
Gene ID: ENSG00000108395
  
Biological name :TRIM37
  
Synonyms : O94972 / TRIM37 / tripartite motif containing 37
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 17
Strand: -1
Band: q22
Gene start: 58982638
Gene end: 59106921
  
Corresponding Affymetrix probe sets: 1554001_at (Human Genome U133 Plus 2.0 Array)   213009_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000485901
Ensembl peptide - ENSP00000464666
Ensembl peptide - ENSP00000464688
Ensembl peptide - ENSP00000262294
Ensembl peptide - ENSP00000376784
Ensembl peptide - ENSP00000376785
Ensembl peptide - ENSP00000462340
Ensembl peptide - ENSP00000462778
Ensembl peptide - ENSP00000462863
Ensembl peptide - ENSP00000464263
Ensembl peptide - ENSP00000464590
NCBI entrez gene - 4591     See in Manteia.
OMIM - 605073
RefSeq - XM_017024674
RefSeq - XM_011524833
RefSeq - XM_011524834
RefSeq - XM_011524836
RefSeq - XM_017024662
RefSeq - XM_017024663
RefSeq - XM_017024664
RefSeq - XM_017024665
RefSeq - XM_017024666
RefSeq - XM_017024667
RefSeq - XM_017024668
RefSeq - XM_017024669
RefSeq - XM_017024670
RefSeq - XM_017024671
RefSeq - XM_017024672
RefSeq - XM_017024673
RefSeq - NM_001005207
RefSeq - NM_001320987
RefSeq - NM_001320988
RefSeq - NM_001320989
RefSeq - NM_001320990
RefSeq - NM_001353083
RefSeq - NM_015294
RefSeq - XM_005257385
RefSeq - XM_011524831
RefSeq - XM_011524832
RefSeq Peptide - NP_001307916
RefSeq Peptide - NP_001307917
RefSeq Peptide - NP_001307918
RefSeq Peptide - NP_001307919
RefSeq Peptide - NP_001340012
RefSeq Peptide - NP_056109
RefSeq Peptide - NP_001005207
swissprot - J3KT32
swissprot - O94972
swissprot - J3KT90
swissprot - J3QRK3
swissprot - J3QSA0
swissprot - J3QSF6
swissprot - J3QSH5
swissprot - J3KS72
Ensembl - ENSG00000108395
  
Related genetic diseases (OMIM): 253250 - Mulibrey nanism, 253250
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 trim37ENSDARG00000076473Danio rerio
 TRIM37ENSGALG00000005084Gallus gallus
 Q6PCX9ENSMUSG00000018548Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000315  B-box-type zinc finger
 IPR001841  Zinc finger, RING-type
 IPR002083  MATH/TRAF domain
 IPR003649  B-box, C-terminal
 IPR008974  TRAF-like
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR037299  TRIM37, MATH domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IDA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0016567 protein ubiquitination IEA
 biological_processGO:0032088 negative regulation of NF-kappaB transcription factor activity IDA
 biological_processGO:0035518 histone H2A monoubiquitination IDA
 biological_processGO:0036353 histone H2A-K119 monoubiquitination IDA
 biological_processGO:0046600 negative regulation of centriole replication IMP
 biological_processGO:0051091 positive regulation of DNA-binding transcription factor activity IDA
 biological_processGO:0051092 positive regulation of NF-kappaB transcription factor activity IDA
 biological_processGO:0051865 protein autoubiquitination IDA
 biological_processGO:0070842 aggresome assembly IDA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005777 peroxisome IEA
 cellular_componentGO:0005829 cytosol IDA
 cellular_componentGO:0016235 aggresome IDA
 cellular_componentGO:0035098 ESC/E(Z) complex IDA
 cellular_componentGO:0048471 perinuclear region of cytoplasm IEA
 molecular_functionGO:0003682 chromatin binding IEA
 molecular_functionGO:0004842 ubiquitin-protein transferase activity IDA
 molecular_functionGO:0005164 tumor necrosis factor receptor binding IPI
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0031625 ubiquitin protein ligase binding IPI
 molecular_functionGO:0042803 protein homodimerization activity IDA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0061630 ubiquitin protein ligase activity IDA


Pathways (from Reactome)
Pathway description
Antigen processing: Ubiquitination & Proteasome degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000171 Microglossia 
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 HP:0000256 Macrocephaly "The presence of an abnormally large `skull` (FMA:46565)." [HPO:probinson]
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 HP:0000268 Dolichocephaly 
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 HP:0000316 Hypertelorism 
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 HP:0000325 Triangular facies 
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 HP:0000431 Broad nasal bridge "Increased horizontal dimension of the upper, bony part of the nose." [HPO:curators]
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 HP:0000483 Astigmatism 
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 HP:0000486 Strabismus "Strabismus (also known as squint) is a condition in which the eyes are not properly aligned with each other." [HPO:curators]
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 HP:0000580 Pigmentary retinopathy 
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 HP:0000668 Hypodontia "Hypodontia describes a situation when there are fewer than the normal number of teeth, whereby 6 teeth or fewer teeth are missing (oligodontia refers to the condition of missing more than 6 teeth and the congenital absence of all teeth is called anodontia)." [HPO:curators]
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 HP:0000678 Dental overcrowding 
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 HP:0001252 Muscular hypotonia "Muscular hypotonia is an abnormally low muscle tone (the amount of tension or resistance to movement in a muscle), often involving reduced muscle strength. Hypotonia is characterized by a diminished resistance to passive stretching." [HPO:curators]
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 HP:0001260 Dysarthria "Dysarthric speech is a general description referring to a neurological speech disorder characterized by poor articulation. Depending on the involved neurological structures, dysarthria may be further classified as spastic, flaccid, ataxic, hyperkinetic and hypokinetic, or mixed." [HPO:curators]
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 HP:0001315 Reduced reflexes 
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 HP:0001511 Intrauterine growth retardation 
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 HP:0001620 High pitched voice 
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 HP:0001621 Soft voice 
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 HP:0001635 Congestive heart failure "The presence of an abnormality of cardiac function that is responsible for the failure of the heart to pump blood at a rate that is commensurate with the needs of the tissues or a state in which abnormally elevated filling pressures are required for the heart to do so. Heart failure is frequently related to a defect in myocardial contraction." [HPO:curators]
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 HP:0001685 Myocardial fibrosis 
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 HP:0002007 Frontal bossing "The presence of an unusually prominent forehead." [HPO:curators]
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 HP:0002119 Ventriculomegaly 
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 HP:0002240 Hepatomegaly "An abnormal enlargment of the liver." [HPO:curators]
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 HP:0002667 Nephroblastoma (Wilms tumor) "A kind of renal tumor primarily affecting children. It is characterized by an abnormal proliferation of the metanephric blastema cells, which are believed to be primitive embryologic cells of the kidney. Clinically, nephroblatoma usually presents as an abdominal mass, and in some cases with abdominal pain, hypertension, hematuria, and fever." [HPO:curators]
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 HP:0002680 J-shaped sella turcica "A deformity of the sella turcica whereby the sella extends further anterior than normal such that the anterior clinoid process appears to overhang it, giving the appearance of the letter J on imaging of the skull." [HPO:curators]
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 HP:0002688 Absent frontal sinuses 
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 HP:0002738 Hypoplastic frontal sinuses 
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 HP:0003764 Abnormal or excess nevi 
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 HP:0004322 Decreased body height "A height below that which is expected according to age and gender norms. Although there is no universally accepted definition of short stature, many refer to "short stature" as height more than 2 standard deviations below the mean for age and gender (or below the 3rd percentile for age and gender dependent norms)." [HPO:curators]
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 HP:0004326 Cachexia 
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 HP:0005132 Pericardial constriction 
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 HP:0005280 Depressed nasal root and bridge 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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