ENSGALG00000005084


Gallus gallus

Features
Gene ID: ENSGALG00000005084
  
Biological name :TRIM37
  
Synonyms : E3 ubiquitin-protein ligase TRIM37 / TRIM37
  
Possible biological names infered from orthology : O94972 / Q6PCX9 / tripartite motif containing 37
  
Species: Gallus gallus
  
Chr. number: 19
Strand: -1
Band:
Gene start: 7176469
Gene end: 7197229
  
Corresponding Affymetrix probe sets: GgaAffx.21686.1.S1_s_at (Chicken Array)   GgaAffx.3185.1.S1_s_at (Chicken Array)   GgaAffx.3185.3.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000008139
NCBI entrez gene - 417628     See in Manteia.
RefSeq - NM_001006224
RefSeq - XM_015295779
RefSeq Peptide - NP_001006224
swissprot - F1NYX7
Ensembl - ENSGALG00000005084
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 trim37ENSDARG00000076473Danio rerio
 O94972ENSG00000108395Homo sapiens
 Q6PCX9ENSMUSG00000018548Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000315  B-box-type zinc finger
 IPR001841  Zinc finger, RING-type
 IPR002083  MATH/TRAF domain
 IPR003649  B-box, C-terminal
 IPR008974  TRAF-like
 IPR013083  Zinc finger, RING/FYVE/PHD-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IEA
 biological_processGO:0016567 protein ubiquitination IEA
 biological_processGO:0032088 negative regulation of NF-kappaB transcription factor activity IEA
 biological_processGO:0035518 histone H2A monoubiquitination IEA
 biological_processGO:0036353 histone H2A-K119 monoubiquitination IEA
 biological_processGO:0046600 negative regulation of centriole replication IEA
 biological_processGO:0051091 positive regulation of DNA-binding transcription factor activity IEA
 biological_processGO:0051092 positive regulation of NF-kappaB transcription factor activity IEA
 biological_processGO:0051865 protein autoubiquitination IEA
 biological_processGO:0070842 aggresome assembly IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005777 peroxisome IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0016235 aggresome IEA
 cellular_componentGO:0035098 ESC/E(Z) complex IEA
 molecular_functionGO:0003682 chromatin binding IEA
 molecular_functionGO:0004842 ubiquitin-protein transferase activity IEA
 molecular_functionGO:0005164 tumor necrosis factor receptor binding IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0031625 ubiquitin protein ligase binding IEA
 molecular_functionGO:0042803 protein homodimerization activity IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0061630 ubiquitin protein ligase activity IEA


Pathways (from Reactome)
Pathway description
Antigen processing: Ubiquitination & Proteasome degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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