ENSG00000108439


Homo sapiens

Features
Gene ID: ENSG00000108439
  
Biological name :PNPO
  
Synonyms : PNPO / pyridoxamine 5-phosphate oxidase / Q9NVS9
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 17
Strand: 1
Band: q21.32
Gene start: 47941506
Gene end: 47949308
  
Corresponding Affymetrix probe sets: 218511_s_at (Human Genome U133 Plus 2.0 Array)   222653_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000492965
Ensembl peptide - ENSP00000493349
Ensembl peptide - ENSP00000493348
Ensembl peptide - ENSP00000493302
Ensembl peptide - ENSP00000493224
Ensembl peptide - ENSP00000493219
Ensembl peptide - ENSP00000225573
Ensembl peptide - ENSP00000399960
Ensembl peptide - ENSP00000462345
Ensembl peptide - ENSP00000463919
Ensembl peptide - ENSP00000463972
Ensembl peptide - ENSP00000463994
NCBI entrez gene - 55163     See in Manteia.
OMIM - 603287
RefSeq - NM_018129
RefSeq - XM_005257500
RefSeq - XM_011524968
RefSeq - XM_017024813
RefSeq Peptide - NP_060599
swissprot - A0A286YFL3
swissprot - Q9NVS9
swissprot - V9HW45
swissprot - J3QQZ9
swissprot - A0A286YFA1
swissprot - A0A286YF38
swissprot - A0A286YF16
swissprot - J3KS77
swissprot - J3QQV6
Ensembl - ENSG00000108439
  
Related genetic diseases (OMIM): 610090 - Pyridoxamine 5-phosphate oxidase deficiency, 610090
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pnpoENSDARG00000017612Danio rerio
 PNPOENSGALG00000036683Gallus gallus
 PnpoENSMUSG00000018659Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000659  Pyridoxamine 5"-phosphate oxidase
 IPR011576  Pyridoxamine 5"-phosphate oxidase, putative
 IPR012349  FMN-binding split barrel
 IPR019576  Pyridoxine 5"-phosphate oxidase, dimerisation, C-terminal
 IPR019740  Pyridoxamine 5"-phosphate oxidase, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008615 pyridoxine biosynthetic process IEA
 biological_processGO:0042816 vitamin B6 metabolic process TAS
 biological_processGO:0042823 pyridoxal phosphate biosynthetic process IEA
 biological_processGO:0055114 oxidation-reduction process IEA
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0004733 pyridoxamine-phosphate oxidase activity IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0010181 FMN binding IEA
 molecular_functionGO:0016491 oxidoreductase activity IEA
 molecular_functionGO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEA
 molecular_functionGO:0030170 pyridoxal phosphate binding IDA
 molecular_functionGO:0042803 protein homodimerization activity IDA
 molecular_functionGO:0048037 cofactor binding IEA


Pathways (from Reactome)
Pathway description
Vitamins B6 activation to pyridoxal phosphate


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
Show

 HP:0000253 Microcephaly, progressive "Progressive microcephaly is diagnosed when the head circumference falls progressively behind age- and gender-dependent norms." [HPO:curators]
Show

 HP:0000496 Abnormality of eye movement "An abnormality in voluntary or involuntary eye movements or their control." [HPO:probinson]
Show

 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
Show

 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
Show

 HP:0001276 Hypertonia 
Show

 HP:0001298 Encephalopathy 
Show

 HP:0001336 Myoclonus "Very brief, involuntary random muscular contractions occurring at rest, in response to sensory stimuli, or accompanying voluntary movements." [HPO:curators]
Show

 HP:0001508 Failure to thrive 
Show

 HP:0001622 Premature birth 
Show

 HP:0001903 Anemia 
Show

 HP:0001942 Metabolic acidosis 
Show

 HP:0001943 Hypoglycemia "A lower than normal level of blood glucose." [HPO:curators]
Show

 HP:0002151 Increased serum lactate "Abnormally increased level of blood lactate (2-hydroxypropanoic acid). Lactate is produced from pyruvate by lactate dehydrogenase during normal metabolism." [HPO:curators]
Show

 HP:0002317 Unsteady gait 
Show

 HP:0003785 Decreased CSF homovanillic acid (HVA) 
Show

 HP:0008872 Feeding problems in infancy 
Show

 HP:0008936 Muscular hypotonia of the trunk "Muscular hypotonia (abnormally low muscle tone) affecting the musculature of the trunk." [HPO:curators]
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000108439 PNPO / Q9NVS9 / pyridoxamine 5-phosphate oxidase  / complex






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   


© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr