ENSG00000109099


Homo sapiens

Features
Gene ID: ENSG00000109099
  
Biological name :PMP22
  
Synonyms : peripheral myelin protein 22 / PMP22 / Q01453
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 17
Strand: -1
Band: p12
Gene start: 15229777
Gene end: 15265357
  
Corresponding Affymetrix probe sets: 210139_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000494871
Ensembl peptide - ENSP00000494628
Ensembl peptide - ENSP00000496522
Ensembl peptide - ENSP00000308937
Ensembl peptide - ENSP00000379268
Ensembl peptide - ENSP00000379269
Ensembl peptide - ENSP00000409824
Ensembl peptide - ENSP00000462782
Ensembl peptide - ENSP00000464468
Ensembl peptide - ENSP00000484631
NCBI entrez gene - 5376     See in Manteia.
OMIM - 601097
RefSeq - XM_017024776
RefSeq - NM_000304
RefSeq - NM_001281455
RefSeq - NM_001281456
RefSeq - NM_153321
RefSeq - NM_153322
RefSeq - XM_017024775
RefSeq Peptide - NP_000295
RefSeq Peptide - NP_001268384
RefSeq Peptide - NP_001268385
RefSeq Peptide - NP_696996
RefSeq Peptide - NP_696997
RefSeq Peptide - NP_001317072
swissprot - Q01453
swissprot - A8MU75
swissprot - J3KQW0
swissprot - J3KT36
swissprot - J3QS08
swissprot - Q6FH25
Ensembl - ENSG00000109099
  
Related genetic diseases (OMIM): 139393 - ?Neuropathy, inflammatory demyelinating, 139393
  118220 - Charcot-Marie-Tooth disease, type 1A, 118220
  118300 - Charcot-Marie-Tooth disease, type 1E, 118300
  145900 - Dejerine-Sottas disease, 145900
  162500 - Neuropathy, recurrent, with pressure palsies, 162500
  180800 - Roussy-Levy syndrome, 180800
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pmp22aENSDARG00000105223Danio rerio
 pmp22bENSDARG00000060457Danio rerio
 PMP22ENSGALG00000031425Gallus gallus
 Pmp22ENSMUSG00000018217Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
EMP2 / P54851 / epithelial membrane protein 2ENSG0000021385345
EMP3 / P54852 / epithelial membrane protein 3ENSG0000014222743
EMP1 / P54849 / epithelial membrane protein 1ENSG0000013453139


Protein motifs (from Interpro)
Interpro ID Name
 IPR003936  Peripheral myelin protein PMP22
 IPR004031  PMP-22/EMP/MP20/Claudin superfamily
 IPR004032  PMP-22/EMP/MP20


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007268 chemical synaptic transmission TAS
 biological_processGO:0007422 peripheral nervous system development TAS
 biological_processGO:0008219 cell death IDA
 biological_processGO:0008285 negative regulation of cell proliferation IEA
 biological_processGO:0010977 negative regulation of neuron projection development IEA
 biological_processGO:0030154 cell differentiation IEA
 biological_processGO:0032060 bleb assembly IDA
 biological_processGO:0042552 myelination IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005923 bicellular tight junction IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0043218 compact myelin IEA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000365 Hearing loss 
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 HP:0000407 Hearing loss, sensorineural "Hearing loss caused by damage or dysfunction of the auditory nerve (cranial nerve VIII)." [HPO:curators]
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 HP:0000639 Nystagmus "Rhythmic, involuntary oscillations of one or both eyes related to abnormality in fixation, conjugate gaze, or vestibular mechanisms." [HPO:curators]
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 HP:0001171 Ectrodactyly (hands) 
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 HP:0001178 Claw hand deformities (in severe cases) 
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 HP:0001252 Muscular hypotonia "Muscular hypotonia is an abnormally low muscle tone (the amount of tension or resistance to movement in a muscle), often involving reduced muscle strength. Hypotonia is characterized by a diminished resistance to passive stretching." [HPO:curators]
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 HP:0001265 Hyporeflexia 
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 HP:0001270 Motor retardation 
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 HP:0001284 Areflexia 
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 HP:0001288 Gait disturbance "The term gait disturbance can refer to any disruption of the ability to walk. In general, this can refer to neurological diseases but also fractures or other sources of pain that is triggered upon walking. However, in the current context gait disturbance refers to difficulty walking on the basis of a neurological or muscular disease." [HPO:curators]
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 HP:0001290 Generalized hypotonia "Generalized muscular hypotonia (abnormally low muscle tone)." [HPO:curators]
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 HP:0001324 Muscle weakness "Reduced strength of muscles." [HPO:curators]
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 HP:0001425 Heterogeneous 
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 HP:0001605 Vocal cord paralysis 
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 HP:0001761 Pes cavus 
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 HP:0001765 Hammer toes 
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 HP:0001884 Talipes calcaneovalgus "Talipes calcaneovalgus is a flexible foot deformity (as opposed to a rigid congenital vertical talus foot deformity) that can either present as a positional or structural foot deformity depending on severity and/or causality. The axis of calcaneovalgus deformity is in the tibiotalar joint, where the foot is positioned in extreme hyperextension. On inspection, the foot has an "up and out" appearance, with the dorsal forefoot practically touching the anterior aspect of the ankle and lower leg." [HPO:curators]
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 HP:0002066 Gait ataxia "Impairment of the ability to coordinate the movements required for normal walking." [HPO:curators]
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 HP:0002093 Respiratory insufficiency 
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 HP:0002460 Distal muscle weakness "Reduced strength of the distal musculature." [HPO:curators]
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 HP:0002650 Scoliosis "The presence of an abnormal lateral curvature of the spine." [HPO:curators]
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 HP:0002715 Immunological abnormality 
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 HP:0002751 Kyphoscoliosis 
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 HP:0002922 Increased CSF protein 
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 HP:0002936 Distal sensory impairment 
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 HP:0003376 Steppage gait "An abnormal gait pattern that arises from weakness of the pretibial and peroneal muscles due to a lower motor neuron lesion. Affected patients have footdrop and are unable to dorsiflex and evert the foot. The leg is lifted high on walking so that the toes clear the ground, and there may be a slapping noise when the foot strikes the ground again." [HPO:curators]
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 HP:0003380 Decreased number of myelinated fibers "A loss of myelinated nerve fibers (in general, this finding can be observed on nerve biopsy)." [HPO:curators]
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 HP:0003382 Hypertrophic nerve changes 
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 HP:0003383 Onion bulb formations on nerve biopsy 
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 HP:0003401 Paresthesia "Abnormal sensations such as tingling, pricking, or numbness of the skin with no apparent physical cause." [HPO:curators]
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 HP:0003431 Decreased motor nerve conduction velocity (NCV) 
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 HP:0003449 Cold-induced muscle cramps 
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 HP:0003481 Segmental demyelination/remyelination 
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 HP:0003587 Insidious onset 
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 HP:0003593 Early onset 
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 HP:0003621 Juvenile onset 
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 HP:0003677 Slow progression 
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 HP:0003690 Limb muscle weakness "Weakness of the muscles of the arms and legs." [HPO:curators]
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 HP:0003693 Distal amyotrophy "Muscular atrophy affecting muscles in the distal portions of the extremities." [HPO:curators]
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 HP:0003828 Variable expressivity 
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 HP:0004336 Myelin outfoldings 
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 HP:0006824 Cranial nerve paralysis 
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 HP:0007131 Acute demyelinating polyneuropathy 
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 HP:0007351 Upper limb postural tremor 
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 HP:0009027 Foot dorsiflexor weakness 
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 HP:0009830 Peripheral neuropathy "Peripheral neuropathy is a general term for any disorder of the peripheral nervous system. The main clinical features used to classify peripheral neuropathy are distribution, type (mainly demyelinating versus mainly axonal), duration, and course." [HPO:curators]
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 HP:0010871 Sensory ataxia "Incoordination of movement caused by a deficit in the sensory nervous system. Sensory ataxia can be distinguished from cerebellar ataxia by asking the patient to close his or her eyes. Persons with cerebellar ataxia show only a minimal worsening of symptoms, whereas persons with sensory ataxia show a marked worsening of symptoms." [HPO:probinson]
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 HP:0011463 Childhood onset "Onset of disease at the age of between 1 and 5 years." [DDD:hfirth]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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