ENSDARG00000060457


Danio rerio

Features
Gene ID: ENSDARG00000060457
  
Biological name :pmp22b
  
Synonyms : peripheral myelin protein 22b / pmp22b
  
Possible biological names infered from orthology : peripheral myelin protein 22 / peripheral myelin protein 22 isoform 2 / PMP22 / Q01453
  
Species: Danio rerio
  
Chr. number: 12
Strand: -1
Band:
Gene start: 37275336
Gene end: 37299671
  
Corresponding Affymetrix probe sets: Dr.5586.1.S1_at (Zebrafish Array)   Dr.5586.2.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000120770
Ensembl peptide - ENSDARP00000079636
NCBI entrez gene - 678607     See in Manteia.
RefSeq - NM_001040355
RefSeq Peptide - NP_001035445
swissprot - E9QIT6
swissprot - Q1RLQ8
ZFIN ID - ZDB-GENE-060421-4337
Ensembl - ENSDARG00000060457
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PMP22ENSGALG00000031425Gallus gallus
 PMP22ENSG00000109099Homo sapiens
 Pmp22ENSMUSG00000018217Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
pmp22a / peripheral myelin protein 22a / PMP22* / Q01453* / peripheral myelin protein 22* / peripheral myelin protein 22 isoform 2 *ENSDARG0000010522354
emp3b / epithelial membrane protein 3b / EMP3* / P54852* / O35912* / epithelial membrane protein 3*ENSDARG0000010146143
si:dkey-264d12.4 / EMP3* / O35912* / P54852* / epithelial membrane protein 3*ENSDARG0000003642841
emp2 / F1QIK8 / epithelial membrane protein 2 / O88662* / P54851*ENSDARG0000004458840
emp1 / epithelial membrane protein 1 / P47801* / P54849*ENSDARG0000006963236


Protein motifs (from Interpro)
Interpro ID Name
 IPR003936  Peripheral myelin protein PMP22
 IPR004031  PMP-22/EMP/MP20/Claudin superfamily
 IPR004032  PMP-22/EMP/MP20


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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