ENSG00000111199


Homo sapiens

Features
Gene ID: ENSG00000111199
  
Biological name :TRPV4
  
Synonyms : Q9HBA0 / transient receptor potential cation channel subfamily V member 4 / TRPV4
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 12
Strand: -1
Band: q24.11
Gene start: 109783085
Gene end: 109833401
  
Corresponding Affymetrix probe sets: 219516_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000444336
Ensembl peptide - ENSP00000442738
Ensembl peptide - ENSP00000443611
Ensembl peptide - ENSP00000261740
Ensembl peptide - ENSP00000406191
Ensembl peptide - ENSP00000437449
Ensembl peptide - ENSP00000442167
NCBI entrez gene - 59341     See in Manteia.
OMIM - 605427
RefSeq - XM_017019774
RefSeq - NM_001177428
RefSeq - NM_001177431
RefSeq - NM_001177433
RefSeq - NM_021625
RefSeq - NM_147204
RefSeq - XM_011538630
RefSeq - XM_011538631
RefSeq - XM_011538632
RefSeq - XM_011538633
RefSeq - XM_011538634
RefSeq - XM_011538635
RefSeq - XM_011538636
RefSeq - XM_005253918
RefSeq Peptide - NP_001170899
RefSeq Peptide - NP_001170902
RefSeq Peptide - NP_001170904
RefSeq Peptide - NP_067638
RefSeq Peptide - NP_671737
swissprot - Q9HBA0
swissprot - F5H6Q4
Ensembl - ENSG00000111199
  
Related genetic diseases (OMIM): 617383 - ?Avascular necrosis of femoral head, primary, 2, 617383
  113500 - Brachyolmia type 3, 113500
  606835 - Digital arthropathy-brachydactyly, familial, 606835
  606071 - Hereditary motor and sensory neuropathy, type IIc, 606071
  156530 - Metatropic dysplasia, 156530
  168400 - Parastremmatic dwarfism, 168400
  184095 - SED, Maroteaux type, 184095
  181405 - Scapuloperoneal spinal muscular atrophy, 181405
  600175 - Spinal muscular atrophy, distal, congenital nonprogressive, 600175
  184252 - Spondylometaphyseal dysplasia, Kozlowski type, 184252
  613508 - [Sodium serum level QTL 1], 613508
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 trpv4ENSDARG00000061941Danio rerio
 TRPV4ENSGALG00000036360Gallus gallus
 Trpv4ENSMUSG00000014158Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TRPV1 / Q8NER1 / transient receptor potential cation channel subfamily V member 1ENSG0000019668942
TRPV2 / Q9Y5S1 / transient receptor potential cation channel subfamily V member 2ENSG0000018768838
TRPV3 / Q8NET8 / transient receptor potential cation channel subfamily V member 3ENSG0000016772335
TRPV6 / Q9H1D0 / transient receptor potential cation channel subfamily V member 6ENSG0000016512524
TRPV5 / Q9NQA5 / transient receptor potential cation channel subfamily V member 5ENSG0000012741223


Protein motifs (from Interpro)
Interpro ID Name
 IPR002110  Ankyrin repeat
 IPR004729  Transient receptor potential channel
 IPR005821  Ion transport domain
 IPR008347  Transient receptor potential channel, vanilloid 1-4
 IPR008348  Transient receptor potential channel, vanilloid 4
 IPR020683  Ankyrin repeat-containing domain
 IPR024862  Transient receptor potential cation channel subfamily V
 IPR036770  Ankyrin repeat-containing domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IEA
 biological_processGO:0002024 diet induced thermogenesis IEA
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0006816 calcium ion transport NAS
 biological_processGO:0006874 cellular calcium ion homeostasis IDA
 biological_processGO:0006884 cell volume homeostasis TAS
 biological_processGO:0006970 response to osmotic stress IEA
 biological_processGO:0006971 hypotonic response IEA
 biological_processGO:0007015 actin filament organization ISS
 biological_processGO:0007043 cell-cell junction assembly ISS
 biological_processGO:0007204 positive regulation of cytosolic calcium ion concentration IDA
 biological_processGO:0007231 osmosensory signaling pathway TAS
 biological_processGO:0009612 response to mechanical stimulus TAS
 biological_processGO:0010628 positive regulation of gene expression IEA
 biological_processGO:0010759 positive regulation of macrophage chemotaxis IEA
 biological_processGO:0010977 negative regulation of neuron projection development ISS
 biological_processGO:0030103 vasopressin secretion IEA
 biological_processGO:0031117 positive regulation of microtubule depolymerization ISS
 biological_processGO:0031532 actin cytoskeleton reorganization ISS
 biological_processGO:0032868 response to insulin IEA
 biological_processGO:0034220 ion transmembrane transport IEA
 biological_processGO:0034605 cellular response to heat ISS
 biological_processGO:0042538 hyperosmotic salinity response IEA
 biological_processGO:0042593 glucose homeostasis IEA
 biological_processGO:0043117 positive regulation of vascular permeability IMP
 biological_processGO:0043622 cortical microtubule organization ISS
 biological_processGO:0046330 positive regulation of JNK cascade IEA
 biological_processGO:0046785 microtubule polymerization ISS
 biological_processGO:0047484 regulation of response to osmotic stress IEA
 biological_processGO:0050729 positive regulation of inflammatory response IEA
 biological_processGO:0050891 multicellular organismal water homeostasis IMP
 biological_processGO:0055085 transmembrane transport IEA
 biological_processGO:0060351 cartilage development involved in endochondral bone morphogenesis IMP
 biological_processGO:0070374 positive regulation of ERK1 and ERK2 cascade IEA
 biological_processGO:0070509 calcium ion import ISS
 biological_processGO:0070588 calcium ion transmembrane transport TAS
 biological_processGO:0071470 cellular response to osmotic stress ISS
 biological_processGO:0071476 cellular hypotonic response ISS
 biological_processGO:0071477 cellular hypotonic salinity response IEA
 biological_processGO:0071639 positive regulation of monocyte chemotactic protein-1 production IEA
 biological_processGO:0071642 positive regulation of macrophage inflammatory protein 1 alpha production IEA
 biological_processGO:0071651 positive regulation of chemokine (C-C motif) ligand 5 production IEA
 biological_processGO:0097497 blood vessel endothelial cell delamination IMP
 biological_processGO:1903444 negative regulation of brown fat cell differentiation IEA
 biological_processGO:1903759 signal transduction involved in regulation of aerobic respiration IEA
 biological_processGO:2000340 positive regulation of chemokine (C-X-C motif) ligand 1 production IEA
 biological_processGO:2000778 positive regulation of interleukin-6 secretion IEA
 cellular_componentGO:0005881 cytoplasmic microtubule ISS
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0005912 adherens junction ISS
 cellular_componentGO:0005925 focal adhesion ISS
 cellular_componentGO:0005929 cilium IBA
 cellular_componentGO:0009986 cell surface IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane NAS
 cellular_componentGO:0016324 apical plasma membrane IEA
 cellular_componentGO:0030027 lamellipodium ISS
 cellular_componentGO:0030054 cell junction IEA
 cellular_componentGO:0030175 filopodium ISS
 cellular_componentGO:0030426 growth cone ISS
 cellular_componentGO:0030864 cortical actin cytoskeleton ISS
 cellular_componentGO:0031410 cytoplasmic vesicle IEA
 cellular_componentGO:0032587 ruffle membrane ISS
 cellular_componentGO:0042995 cell projection IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003779 actin binding ISS
 molecular_functionGO:0005034 osmosensor activity IEA
 molecular_functionGO:0005080 protein kinase C binding ISS
 molecular_functionGO:0005216 ion channel activity IEA
 molecular_functionGO:0005261 cation channel activity IDA
 molecular_functionGO:0005262 calcium channel activity TAS
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0005516 calmodulin binding IMP
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0008017 microtubule binding ISS
 molecular_functionGO:0015275 stretch-activated, cation-selective, calcium channel activity IMP
 molecular_functionGO:0019901 protein kinase binding IPI
 molecular_functionGO:0042169 SH2 domain binding ISS
 molecular_functionGO:0042802 identical protein binding IPI
 molecular_functionGO:0043014 alpha-tubulin binding ISS
 molecular_functionGO:0048487 beta-tubulin binding ISS
 molecular_functionGO:0051015 actin filament binding ISS


Pathways (from Reactome)
Pathway description
TRP channels


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000012 Urinary urgency 
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 HP:0000020 Urinary incontinence "Loss of the ability to control the urinary bladder leading to involuntary urination." [HPO:sdoelken]
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 HP:0000175 Cleft palate "Cleft palate is a developmental defect of the `palate` (FMA:54549) resulting from a failure of fusion of the palatine processes." [HPO:curators]
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 HP:0000238 Hydrocephalus 
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 HP:0000271 Abnormality of the face 
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 HP:0000348 High forehead "An abnormally increased height of the forehead." [HPO:curators]
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 HP:0000368 Low-set, posteriorly rotated ears 
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 HP:0000407 Hearing loss, sensorineural "Hearing loss caused by damage or dysfunction of the auditory nerve (cranial nerve VIII)." [HPO:curators]
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 HP:0000470 Short neck 
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 HP:0000473 Torticollis 
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 HP:0000478 Abnormality of the eyes "Any abnormality of the `eyes` (FMA:54448), including location, spacing, and intraocular abnormalities." [HPO:curators]
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 HP:0000518 Cataract "A cataract is an opacity or clouding that develops in the crystalline `lens` (FMA:58241) of the eye or in its `capsule` (FMA:58881)." [HPO:probinson]
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 HP:0000540 Hypermetropia 
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 HP:0000763 Sensory neuropathy "Peripheral neuropathy affecting primarily the sensory nerves." [HPO:curators]
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 HP:0000768 Pectus carinatum "A deformity of the chest caused by overgrowth of the ribs and characterized by protrusion of the sternum." [HPO:curators]
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 HP:0000772 Abnormality of the ribs 
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 HP:0000774 Narrow chest 
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 HP:0000926 Platyspondyly 
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 HP:0000944 Abnormality of the metaphyses 
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 HP:0001156 Brachydactyly 
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 HP:0001252 Muscular hypotonia "Muscular hypotonia is an abnormally low muscle tone (the amount of tension or resistance to movement in a muscle), often involving reduced muscle strength. Hypotonia is characterized by a diminished resistance to passive stretching." [HPO:curators]
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 HP:0001265 Hyporeflexia 
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 HP:0001270 Motor retardation 
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 HP:0001284 Areflexia 
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 HP:0001288 Gait disturbance "The term gait disturbance can refer to any disruption of the ability to walk. In general, this can refer to neurological diseases but also fractures or other sources of pain that is triggered upon walking. However, in the current context gait disturbance refers to difficulty walking on the basis of a neurological or muscular disease." [HPO:curators]
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 HP:0001371 Contractures 
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 HP:0001376 Decreased mobility of joints 
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 HP:0001385 Hip dysplasia 
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 HP:0001387 Joint stiffness "Joint stiffness is a perceived sensation of tightness in a joint or joints when attempting to move them after a period of inactivity. Joint stiffness typically subsides over time." [HPO:curators]
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 HP:0001498 Carpal bone hypoplasia 
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 HP:0001547 Abnormality of the morphology or size of the rib cage 
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 HP:0001552 Barrel-shaped chest 
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 HP:0001558 Decreased fetal movement "An abnormal reduction in quantity or strength of fetal movements." [HPO:curators]
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 HP:0001604 Vocal cord paresis 
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 HP:0001760 Abnormality of the feet "An abnormality of the feet (foot deformity) is a disorder of the foot that can either be congenital or acquired. Such deformities can include hammer toe, club foot deformity, flat feet, pes cavus, Congenital vertical talus (rocker bottom foot) & etc." [HPO:curators]
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 HP:0001761 Pes cavus 
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 HP:0001762 Talipes equinovarus "Also called clubfoot typically has 4 main components: inversion and adduction of the forefoot; inversion of the heel and hindfoot; equinus (limitation of extension) of the ankle and subtalar joint; and internal rotation of the leg. Clubfoot is a complex, multifactorial deformity with genetic and intrauterine factors. One popular theory postulates that a clubfoot is a result of intrauterine maldevelopment of the talus that leads to adduction and plantarflexion of the foot. On radiographic projection a clubfoot can be noted as parallel axes of talus and calcaneus." [HPO:curators]
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 HP:0001763 Pes planus "A condition in which the arch of the foot is flat, with the entire sole of the foot being in near-complete contact with the ground." [HPO:curators]
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 HP:0001765 Hammer toes 
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 HP:0001840 Metatarsus varus "Metatarsus varus (adductus) is one of the most common foot deformities, that is defined as a transverse plane deformity in Lisfranc s (tarsometatarsal) joints in which the metatarsals are deviated medially. The relationship between talus and calcaneus is normal. On inspection the toes angle abruptly towards the midline, creating a C-shaped lateral foot border with a prominent styloid process of the 5th metatarsal. The result is that the forefoot is twisted inwards relative to the heel, so that the sole faces the midline." [HPO:curators]
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 HP:0001857 Hypoplastic distal phalanges (feet) 
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 HP:0001989 Early severe fetal akinesia sequence 
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 HP:0002136 Broad-based gait "An abnormal gait pattern in which persons stand and walk with their feet spaced widely apart. This is often a component of cerebellar ataxia." [HPO:curators]
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 HP:0002176 Spinal cord compression 
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 HP:0002460 Distal muscle weakness "Reduced strength of the distal musculature." [HPO:curators]
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 HP:0002515 Waddling gait 
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 HP:0002650 Scoliosis "The presence of an abnormal lateral curvature of the spine." [HPO:curators]
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 HP:0002652 Skeletal dysplasia 
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 HP:0002655 Spondyloepiphyseal dysplasia 
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 HP:0002656 Epiphyseal dysplasia 
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 HP:0002657 Spondylometaphyseal dysplasia 
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 HP:0002750 Delayed skeletal maturation "A decreased rate of skeletal maturation. Delayed skeletal maturation can be diagnosed on the basis of an estimation of the bone age from radiographs of specific bones in the human body." [HPO:curators]
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 HP:0002751 Kyphoscoliosis 
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 HP:0002766 Relatively short spine 
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 HP:0002804 Arthrogryposis multiplex congenita 
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 HP:0002808 Kyphosis 
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 HP:0002810 Dumbbell-shaped metaphyses 
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 HP:0002812 Coxa vara 
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 HP:0002822 Hyperplastic femoral trochanters 
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 HP:0002825 Caudal appendage "The presence of a tail-like skin appendage located adjacent to the sacrum." [HPO:probinson]
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 HP:0002826 Halberd-shaped pelvis 
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 HP:0002831 Long coccyx 
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 HP:0002834 Flared femurs and humeri 
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 HP:0002857 Genu valgum 
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 HP:0002870 Obstructive sleep apnea "A condition characterized by obstruction of the airway and by pauses in breathing during sleep occurring many times during the night. Obstructive sleep apnea is related to a relaxation of muscle tone (which normally occurs during sleep) leading to partial collapse of the soft tissues in the airway with resultant obstruction of the air flow." [HPO:curators]
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 HP:0002878 Early respiratory failure 
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 HP:0002879 Anisospondyly 
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 HP:0002936 Distal sensory impairment 
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 HP:0002983 Micromelia 
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 HP:0002987 Elbow contractures 
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 HP:0003015 Metaphyseal flaring "The presence of splayed (i.e.,flared) metaphyseal segments of the long bones." [HPO:curators]
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 HP:0003037 Enlarged joints 
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 HP:0003040 Arthropathy 
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 HP:0003103 Abnormality of cortical bone "An abnormality of cortical bone (also known as compact bone), which forms the dense surface of bones." [HPO:curators]
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 HP:0003180 Flat acetabular roofs 
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 HP:0003236 Elevated serum creatine phosphokinase 
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 HP:0003273 Hip contractures 
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 HP:0003307 Hyperlordosis 
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 HP:0003311 Hypoplastic odontoid process 
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 HP:0003312 Abnormal form of the vertebral bodies 
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 HP:0003332 Absent primary metaphyseal spongiosa 
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 HP:0003336 Arrest of endochondral ring structures with persistence of circumferential growth 
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 HP:0003391 Gower sign "A phenomen whereby patients are not able to stand up without the use of the hands owing to weakness of the proximal muscles of the lower limbs." [HPO:probinson]
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 HP:0003411 Irregular proximal femoral metaphyses 
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 HP:0003477 Axonal neuropathy 
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 HP:0003510 Short stature, severe "A severe degree of short stature." [HPO:curators]
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 HP:0003521 Short stature, disproportionate (short trunk) 
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 HP:0003555 Muscle fiber splitting "Fiber splitting or branching is a common finding in human and rat skeletal muscle pathology. Fiber splitting refers to longitudinal halving of the complete fiber, while branching originates from a regenerating end of a necrotic fiber as invaginations of the sarcolemma. In fiber branching, one end of the fiber remains intact as a single entity, while the other end has several branches." [pmid:6123177]
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 HP:0003562 Abnormal metaphyseal vascular invasion 
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 HP:0003621 Juvenile onset 
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 HP:0003634 Generalized amyoplasia "Generalized congenital lack of development of the muscles, which are then replaced by a mixture of dense fat and fibrous tissue." [HPO:curators]
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 HP:0003674 Age of onset 
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 HP:0003680 Nonprogressive disorder 
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 HP:0003691 Scapular winging 
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 HP:0003693 Distal amyotrophy "Muscular atrophy affecting muscles in the distal portions of the extremities." [HPO:curators]
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 HP:0003697 Scapuloperoneal atrophy 
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 HP:0003724 Shoulder girdle muscle atrophy "Amyotrophy affecting the muscles of the shoulder girdle." [HPO:curators]
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 HP:0003795 Short middle phalanges (feet) 
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 HP:0003812 Phenotypic variability 
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 HP:0003828 Variable expressivity 
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 HP:0003829 Incomplete penetrance 
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 HP:0003911 Flared humeral metaphyses 
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 HP:0004209 Clinodactyly of the 5th finger "Clinodactyly refers to a bending or curvature of the `fifth finger` (FMA:24949) in the radial direction (i.e., towards the 4th finger)." [HPO:curators]
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 HP:0004268 Osteoarthritis of the small joints of the hand 
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 HP:0004322 Decreased body height "A height below that which is expected according to age and gender norms. Although there is no universally accepted definition of short stature, many refer to "short stature" as height more than 2 standard deviations below the mean for age and gender (or below the 3rd percentile for age and gender dependent norms)." [HPO:curators]
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 HP:0004326 Cachexia 
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 HP:0004570 Increased vertebral height 
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 HP:0004878 Respiratory failure due to intercostal muscle and diaphragm involvement 
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 HP:0005042 Irregular, rachitic-like metaphyses 
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 HP:0005108 Abnormality of the intervertebral disks 
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 HP:0005280 Depressed nasal root and bridge 
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 HP:0005793 Absent/hypoplastic distal phalanges of hands and feet 
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 HP:0005819 Abnormally short and broad middle phalanges 
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 HP:0005872 Brachytelomesophalangy 
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 HP:0005930 Abnormality of the epiphyses 
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 HP:0006069 Severe carpal ossification delay 
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 HP:0006239 Brachymesophalangy of hands and feet 
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 HP:0006380 Knee flexion deformities 
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 HP:0006660 Aplastic clavicles 
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 HP:0006703 Aplasia/Hypoplasia of the lungs 
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 HP:0007178 Motor polyneuropathy 
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 HP:0007230 Decreased or absent distal sensory nerve action potential 
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 HP:0007269 Spinal muscular atrophy "Muscular weakness and atrophy related to loss of the motor neurons of the spinal cord and brainstem." [HPO:curators]
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 HP:0008434 Hypoplastic cervical vertebrae 
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 HP:0008833 Irregular acetabular roof 
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 HP:0008922 Short-trunk dwarfism identifiable during childhood 
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 HP:0008955 Progressive distal muscular atrophy "Progressive muscular atrophy affecting muscles in the distal portions of the extremities." [HPO:curators]
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 HP:0008956 Proximal lower limb muscle atrophy "Muscular atrophy affecting proximally located muscles of the legs." [HPO:curators]
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 HP:0008964 Nonprogressive muscular atrophy "Muscular atrophy that does not display a progression in severity with time." [HPO:curators]
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 HP:0009027 Foot dorsiflexor weakness 
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 HP:0009049 Peroneal muscle atrophy "Atrophy of the peroneous muscles, `peroneus longus (also known as Fibularis longus) (FMA:22539), `Peroneus brevis (also known as fibularis brevis` (FMA:22540), and `Peroneus tertius (also known as fibularis tertius` (FMA:22538)." [HPO:probinson]
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 HP:0009060 Scapular muscle atrophy "Atrophy of the muscles that are responsible for moving the scapula, which are the levator scapulae, the infraspinatus muscle, the teres major, the teres minor, and the supraspinatus muscle." [HPO:curators]
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 HP:0009063 Muscle weakness, distal, progressive "Progressively reduced strength of the distal musculature." [HPO:curators]
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 HP:0009113 Diaphragmatic weakness 
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 HP:0009130 Amyotrophy involving the musculature of the hand "Muscular atrophy involving the muscles of the hand." [HPO:curators]
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 HP:0009381 Hypoplastic/small fingers 
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 HP:0009466 Radial deviation of fingers 
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 HP:0009882 Hypoplasia of the distal phalanges of the hand 
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 HP:0010306 Short thorax "Reduced inferior to superior extent of the thorax." [HPO:curators]
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 HP:0010307 Stridor "Stridor is a high pitched sound resulting from turbulent air flow in the upper airway." [HPO:curators]
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 HP:0010628 Facial muscle weakness "A weakness of any or all of the muscles of the face of any etiology." [HPO:curators]
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 HP:0011349 Abducens palsy "Malfunction of the abducens nerve as manifested by impairment of the ability of the affected eye to be moved outward." [HPO:probinson]
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 HP:0011727 Peroneal muscle weakness "Weakness of the peroneal muscles." [HPO:probinson]
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 HP:0012246 Oculomotor nerve palsy "Reduced ability to control the movement of the eye associated with damage to the third cranial nerve (the oculomotor nerve)." [HPO:probinson]
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 HP:0030084 Clinodactyly "An angulation of a digit at an interphalangeal joint in the plane of the palm (finger) or sole (toe)." [pmid:16252026]
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 HP:0100490 Camptodactyly (hands) "Contractures of one ore more joints of the fingers." [HPO:sdoelken]
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 HP:0100670 Rough bone trabeculation 
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 HP:0100818 Long thorax 
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 HP:0100864 Hypoplasia of the femoral neck 
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 HP:0200021 Rounded shoulders 
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 HP:0200055 Small hands 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
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