ENSG00000113649


Homo sapiens

Features
Gene ID: ENSG00000113649
  
Biological name :TCERG1
  
Synonyms : O14776 / TCERG1 / transcription elongation regulator 1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 5
Strand: 1
Band: q32
Gene start: 146447311
Gene end: 146511961
  
Corresponding Affymetrix probe sets: 202396_at (Human Genome U133 Plus 2.0 Array)   229706_at (Human Genome U133 Plus 2.0 Array)   238838_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000296702
Ensembl peptide - ENSP00000377943
Ensembl peptide - ENSP00000450414
NCBI entrez gene - 10915     See in Manteia.
OMIM - 605409
RefSeq - XM_017008983
RefSeq - NM_001040006
RefSeq - NM_006706
RefSeq - XM_017008979
RefSeq - XM_017008980
RefSeq - XM_017008981
RefSeq - XM_017008982
RefSeq - XM_005268365
RefSeq - XM_017008977
RefSeq - XM_017008978
RefSeq Peptide - NP_001035095
RefSeq Peptide - NP_006697
swissprot - O14776
swissprot - G3V220
Ensembl - ENSG00000113649
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CU929230.1ENSDARG00000030665Danio rerio
 tcerg1aENSDARG00000098822Danio rerio
 TCERG1ENSGALG00000007528Gallus gallus
 Q8CGF7ENSMUSG00000024498Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q5VWI1 / TCERG1L / transcription elongation regulator 1 likeENSG0000017676919
O75400 / PRPF40A / pre-mRNA processing factor 40 homolog AENSG0000019650416
Q6NWY9 / PRPF40B / pre-mRNA processing factor 40 homolog BENSG0000011084416


Protein motifs (from Interpro)
Interpro ID Name
 IPR001202  WW domain
 IPR002713  FF domain
 IPR036020  WW domain superfamily
 IPR036517  FF domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IDA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006366 transcription by RNA polymerase II TAS
 cellular_componentGO:0005634 nucleus TAS
 cellular_componentGO:0005654 nucleoplasm IDA
 molecular_functionGO:0001103 RNA polymerase II repressing transcription factor binding IPI
 molecular_functionGO:0003713 transcription coactivator activity TAS
 molecular_functionGO:0003723 RNA binding HDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0042802 identical protein binding IPI
 molecular_functionGO:0070064 proline-rich region binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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