ENSMUSG00000024498


Mus musculus

Features
Gene ID: ENSMUSG00000024498
  
Biological name :Tcerg1
  
Synonyms : Q8CGF7 / Tcerg1 / transcription elongation regulator 1 (CA150)
  
Possible biological names infered from orthology : O14776 / transcription elongation regulator 1
  
Species: Mus musculus
  
Chr. number: 18
Strand: 1
Band: B3
Gene start: 42511510
Gene end: 42575551
  
Corresponding Affymetrix probe sets: 10455346 (MoGene1.0st)   1421033_a_at (Mouse Genome 430 2.0 Array)   1434434_s_at (Mouse Genome 430 2.0 Array)   1450100_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000025375
Ensembl peptide - ENSMUSP00000134458
NCBI entrez gene - 56070     See in Manteia.
MGI - MGI:1926421
RefSeq - XM_006526115
RefSeq - NM_001039474
RefSeq - NM_001289526
RefSeq - XM_006526110
RefSeq - XM_006526111
RefSeq - XM_006526112
RefSeq - XM_006526113
RefSeq Peptide - NP_001276455
RefSeq Peptide - NP_001034563
swissprot - Q3TH57
swissprot - Q8CGF7
Ensembl - ENSMUSG00000024498
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CU929230.1ENSDARG00000030665Danio rerio
 tcerg1aENSDARG00000098822Danio rerio
 TCERG1ENSGALG00000007528Gallus gallus
 O14776ENSG00000113649Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q3B807 / Tcerg1l / Transcription elongation regulator 1-like protein / Q5VWI1* / transcription elongation regulator 1 like*ENSMUSG0000009100219
Prpf40b / pre-mRNA processing factor 40B / Q6NWY9* / pre-mRNA processing factor 40 homolog B*ENSMUSG0000002300716
Q9R1C7 / Prpf40a / Pre-mRNA-processing factor 40 homolog A / O75400*ENSMUSG0000006113616


Protein motifs (from Interpro)
Interpro ID Name
 IPR001202  WW domain
 IPR002713  FF domain
 IPR036020  WW domain superfamily
 IPR036517  FF domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II ISO
 biological_processGO:0006351 transcription, DNA-templated ISS
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm ISO
 molecular_functionGO:0001103 RNA polymerase II repressing transcription factor binding ISO
 molecular_functionGO:0003700 DNA-binding transcription factor activity ISS
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0042802 identical protein binding ISO
 molecular_functionGO:0070064 proline-rich region binding IDA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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