ENSG00000114439


Homo sapiens

Features
Gene ID: ENSG00000114439
  
Biological name :BBX
  
Synonyms : BBX / BBX, HMG-box containing / Q8WY36
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 3
Strand: 1
Band: q13.12
Gene start: 107522936
Gene end: 107811324
  
Corresponding Affymetrix probe sets: 1557239_at (Human Genome U133 Plus 2.0 Array)   213015_at (Human Genome U133 Plus 2.0 Array)   213016_at (Human Genome U133 Plus 2.0 Array)   223134_at (Human Genome U133 Plus 2.0 Array)   223135_s_at (Human Genome U133 Plus 2.0 Array)   226331_at (Human Genome U133 Plus 2.0 Array)   232008_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000396373
Ensembl peptide - ENSP00000400543
Ensembl peptide - ENSP00000414673
Ensembl peptide - ENSP00000413320
Ensembl peptide - ENSP00000413274
Ensembl peptide - ENSP00000412390
Ensembl peptide - ENSP00000408358
Ensembl peptide - ENSP00000408297
Ensembl peptide - ENSP00000407662
Ensembl peptide - ENSP00000406554
Ensembl peptide - ENSP00000404943
Ensembl peptide - ENSP00000404654
Ensembl peptide - ENSP00000403860
Ensembl peptide - ENSP00000403806
Ensembl peptide - ENSP00000402372
Ensembl peptide - ENSP00000401524
Ensembl peptide - ENSP00000319974
Ensembl peptide - ENSP00000385317
Ensembl peptide - ENSP00000385518
Ensembl peptide - ENSP00000385530
Ensembl peptide - ENSP00000392230
NCBI entrez gene - 56987     See in Manteia.
RefSeq - XM_017006883
RefSeq - NM_001142568
RefSeq - NM_001276286
RefSeq - NM_020235
RefSeq - XM_005247642
RefSeq - XM_005247643
RefSeq - XM_005247644
RefSeq - XM_011512999
RefSeq - XM_011513000
RefSeq - XM_011513001
RefSeq - XM_011513002
RefSeq - XM_011513003
RefSeq - XM_011513004
RefSeq - XM_011513005
RefSeq - XM_011513006
RefSeq - XM_011513007
RefSeq - XM_011513010
RefSeq - XM_017006881
RefSeq - XM_017006882
RefSeq Peptide - NP_001263215
RefSeq Peptide - NP_064620
RefSeq Peptide - NP_001136040
swissprot - C9JYU6
swissprot - C9JSH4
swissprot - C9JNU3
swissprot - C9JIZ2
swissprot - C9JE62
swissprot - C9JD74
swissprot - C9JC04
swissprot - C9JA69
swissprot - C9J8D0
swissprot - C9J0J4
swissprot - C9J067
swissprot - C9IYS9
swissprot - H7C1Q0
swissprot - H7C1U1
swissprot - C9IYG9
swissprot - Q8WY36
swissprot - C9K0D1
swissprot - C9JZA0
Ensembl - ENSG00000114439
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 bbxENSDARG00000012699Danio rerio
 BBXENSGALG00000015353Gallus gallus
 BbxENSMUSG00000022641Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CIC / Q96RK0 / capicua transcriptional repressorENSG0000007943216


Protein motifs (from Interpro)
Interpro ID Name
 IPR009071  High mobility group box domain
 IPR019102  HMG box transcription factor BBX, domain of unknown function DUF2028
 IPR036910  High mobility group box domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0060348 bone development IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005829 cytosol IDA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding ISM
 molecular_functionGO:0003677 DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr