ENSG00000115207


Homo sapiens

Features
Gene ID: ENSG00000115207
  
Biological name :GTF3C2
  
Synonyms : general transcription factor IIIC subunit 2 / GTF3C2 / Q8WUA4
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 2
Strand: -1
Band: p23.3
Gene start: 27325849
Gene end: 27357034
  
Corresponding Affymetrix probe sets: 204366_s_at (Human Genome U133 Plus 2.0 Array)   210620_s_at (Human Genome U133 Plus 2.0 Array)   212429_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000399339
Ensembl peptide - ENSP00000482584
Ensembl peptide - ENSP00000414422
Ensembl peptide - ENSP00000409043
Ensembl peptide - ENSP00000408174
Ensembl peptide - ENSP00000264720
Ensembl peptide - ENSP00000352536
Ensembl peptide - ENSP00000389518
Ensembl peptide - ENSP00000393429
NCBI entrez gene - 2976     See in Manteia.
OMIM - 604883
RefSeq - XM_011532801
RefSeq - NM_001035521
RefSeq - NM_001318909
RefSeq - NM_001521
RefSeq - XM_005264272
RefSeq Peptide - NP_001030598
RefSeq Peptide - NP_001305838
RefSeq Peptide - NP_001512
swissprot - C9JQ12
swissprot - A0A087WZD8
swissprot - C9JNH7
swissprot - H0Y4Q6
swissprot - H7C318
swissprot - H7C1A9
swissprot - H7C3X9
swissprot - Q8WUA4
Ensembl - ENSG00000115207
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 gtf3c2ENSDARG00000004574Danio rerio
 GTF3C2ENSGALG00000031281Gallus gallus
 Gm29609ENSMUSG00000101678Mus musculus
 Gtf3c2ENSMUSG00000106864Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR019775  WD40 repeat, conserved site
 IPR036322  WD40-repeat-containing domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IDA
 biological_processGO:0006383 transcription by RNA polymerase III IDA
 biological_processGO:0042791 5S class rRNA transcription by RNA polymerase III IC
 biological_processGO:0042797 tRNA transcription by RNA polymerase III IC
 cellular_componentGO:0000127 transcription factor TFIIIC complex IDA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm TAS
 molecular_functionGO:0003677 DNA binding IDA
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
RNA Polymerase III Abortive And Retractive Initiation
RNA Polymerase III Transcription Initiation From Type 1 Promoter
RNA Polymerase III Transcription Initiation From Type 2 Promoter


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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