ENSMUSG00000106864


Mus musculus

Features
Gene ID: ENSMUSG00000106864
  
Biological name :Gtf3c2
  
Synonyms : Gtf3c2 / Q8BL74 / ral transcription factor 3C polypeptide 2
  
Possible biological names infered from orthology : general transcription factor IIIC subunit 2 / Q8WUA4
  
Species: Mus musculus
  
Chr. number: 5
Strand: -1
Band: B1
Gene start: 31156005
Gene end: 31180144
  
Corresponding Affymetrix probe sets: 10529093 (MoGene1.0st)   1428448_a_at (Mouse Genome 430 2.0 Array)   1428449_at (Mouse Genome 430 2.0 Array)   1440307_at (Mouse Genome 430 2.0 Array)   1452780_at (Mouse Genome 430 2.0 Array)   1452781_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000085325
Ensembl peptide - ENSMUSP00000144675
Ensembl peptide - ENSMUSP00000144489
Ensembl peptide - ENSMUSP00000144427
Ensembl peptide - ENSMUSP00000144249
Ensembl peptide - ENSMUSP00000144212
NCBI entrez gene - 71752     See in Manteia.
MGI - MGI:1919002
RefSeq - NM_027901
RefSeq Peptide - NP_082177
swissprot - A0A0J9YV06
swissprot - A0A0J9YUJ3
swissprot - D3Z7I0
swissprot - Q8BL74
swissprot - D3Z2L1
swissprot - D3YY96
Ensembl - ENSMUSG00000106864
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 gtf3c2ENSDARG00000004574Danio rerio
 GTF3C2ENSGALG00000031281Gallus gallus
 GTF3C2ENSG00000115207Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Gm29609 / GTF3C2* / Q8WUA4* / general transcription factor IIIC subunit 2*ENSMUSG0000010167893


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR019775  WD40 repeat, conserved site
 IPR036322  WD40-repeat-containing domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated ISO
 biological_processGO:0006383 transcription by RNA polymerase III ISO
 cellular_componentGO:0000127 transcription factor TFIIIC complex ISO
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding ISO
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
RNA Polymerase III Transcription Initiation From Type 1 Promoter
RNA Polymerase III Transcription Initiation From Type 2 Promoter


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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