ENSG00000116337


Homo sapiens

Features
Gene ID: ENSG00000116337
  
Biological name :AMPD2
  
Synonyms : adenosine monophosphate deaminase 2 / AMPD2 / Q01433
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: 1
Band: p13.3
Gene start: 109616104
Gene end: 109632051
  
Corresponding Affymetrix probe sets: 212360_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000434891
Ensembl peptide - ENSP00000436303
Ensembl peptide - ENSP00000437164
Ensembl peptide - ENSP00000437025
Ensembl peptide - ENSP00000436541
Ensembl peptide - ENSP00000256578
Ensembl peptide - ENSP00000345498
Ensembl peptide - ENSP00000351573
Ensembl peptide - ENSP00000358855
Ensembl peptide - ENSP00000377292
Ensembl peptide - ENSP00000431904
Ensembl peptide - ENSP00000431975
Ensembl peptide - ENSP00000432344
Ensembl peptide - ENSP00000433739
NCBI entrez gene - 271     See in Manteia.
OMIM - 102771
RefSeq - NM_203404
RefSeq - NM_001257360
RefSeq - NM_001257361
RefSeq - NM_001308170
RefSeq - NM_004037
RefSeq - NM_139156
RefSeq Peptide - NP_981949
RefSeq Peptide - NP_001244289
RefSeq Peptide - NP_001244290
RefSeq Peptide - NP_001295099
RefSeq Peptide - NP_004028
RefSeq Peptide - NP_631895
swissprot - Q01433
swissprot - E9PIJ1
swissprot - A0A024R098
swissprot - H0Y360
swissprot - H0YCL9
swissprot - H0YE32
swissprot - H0YF16
swissprot - E9PJF6
Ensembl - ENSG00000116337
  
Related genetic diseases (OMIM): 615686 - ?Spastic paraplegia 63, 615686
  615809 - Pontocerebellar hypoplasia, type 9, 615809
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ampd2aENSDARG00000104491Danio rerio
 ampd2bENSDARG00000029952Danio rerio
 AMPD2ENSGALG00000034009Gallus gallus
 Ampd2ENSMUSG00000027889Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
AMPD3 / Q01432 / adenosine monophosphate deaminase 3ENSG0000013380544
AMPD1 / P23109 / adenosine monophosphate deaminase 1ENSG0000011674842


Protein motifs (from Interpro)
Interpro ID Name
 IPR001365  Adenosine/AMP deaminase domain
 IPR006329  AMP deaminase
 IPR006650  Adenosine/AMP deaminase active site
 IPR029749  AMP deaminase 2
 IPR032466  Metal-dependent hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006188 IMP biosynthetic process IGI
 biological_processGO:0009117 nucleotide metabolic process IEA
 biological_processGO:0009168 purine ribonucleoside monophosphate biosynthetic process IEA
 biological_processGO:0032264 IMP salvage IEA
 biological_processGO:0043101 purine-containing compound salvage TAS
 biological_processGO:0052652 cyclic purine nucleotide metabolic process IMP
 biological_processGO:0097009 energy homeostasis IGI
 cellular_componentGO:0005575 cellular_component ND
 cellular_componentGO:0005829 cytosol TAS
 molecular_functionGO:0003876 AMP deaminase activity IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0019239 deaminase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Purine salvage


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000158 Macroglossia "Increased length and width of the tongue." [pmid:19125428]
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 HP:0000188 Short upper lip 
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 HP:0000253 Microcephaly, progressive "Progressive microcephaly is diagnosed when the head circumference falls progressively behind age- and gender-dependent norms." [HPO:curators]
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 HP:0000297 Facial hypotonia 
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 HP:0000341 Narrow forehead "An abnormally reduced side-to-side width of the forehead." [HPO:curators]
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 HP:0000377 Abnormal form of ears "Abnormal form of the out part of the ear (also referred to as the auricle or pinna)." [HPO:curators]
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 HP:0000494 Downward slanting palpebral fissures 
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 HP:0000648 Optic atrophy 
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001257 Spasticity "A motor disorder characterized by a velocity-dependent increase in tonic stretch reflexes with increased muscle tone, exaggerated (hyperexcitable) tendon reflexes." [HPO:curators]
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 HP:0001258 Spastic paraplegia 
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001347 Hyperreflexia "The presence of overactive or overresponsive reflexes." [HPO:curators]
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 HP:0002079 Hypoplasia of the corpus callosum "Underdevelopment of the corpus callosum." [HPO:curators]
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 HP:0002119 Ventriculomegaly 
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 HP:0002120 Cerebral cortical atrophy 
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 HP:0002169 Clonus 
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 HP:0002518 Periventricular white matter changes 
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 HP:0003202 Amyotrophy "The presence of muscular atrophy (which is also known as amyotrophy)." [HPO:curators]
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 HP:0003477 Axonal neuropathy 
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 HP:0004322 Decreased body height "A height below that which is expected according to age and gender norms. Although there is no universally accepted definition of short stature, many refer to "short stature" as height more than 2 standard deviations below the mean for age and gender (or below the 3rd percentile for age and gender dependent norms)." [HPO:curators]
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 HP:0004325 Decreased body weight 
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 HP:0008936 Muscular hypotonia of the trunk "Muscular hypotonia (abnormally low muscle tone) affecting the musculature of the trunk." [HPO:curators]
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 HP:0011800 Midface retrusion "Posterior positions and/or vertical shortening of the infraorbital and perialar regions, or increased concavity of the face and/or reduced nasolabial angle." [DDD:jclayton-smith]
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 HP:0012407 Scissor gait "A form of gait abnormality characterized by hypertonia and flexion in the legs, hips and pelvis accompanied by extreme adduction leading to the knees and thighs hitting, or sometimes even crossing, in a scissors-like movement. The opposing muscles (abductors) become comparatively weak from lack of use." [HPO:probinson]
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 HP:0100704 Cortical visual impairment "A form of loss of vision caused by damage to the visual cortex rather than a defect in the eye." [HPO:probinson]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000116337 AMPD2 / Q01433 / adenosine monophosphate deaminase 2  / complex






 

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