ENSG00000116752


Homo sapiens

Features
Gene ID: ENSG00000116752
  
Biological name :BCAS2
  
Synonyms : BCAS2 / BCAS2, pre-mRNA processing factor / O75934
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: -1
Band: p13.2
Gene start: 114567557
Gene end: 114581639
  
Corresponding Affymetrix probe sets: 203053_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000358554
NCBI entrez gene - 10286     See in Manteia.
OMIM - 605783
RefSeq - NM_005872
RefSeq Peptide - NP_005863
swissprot - B2R7W3
swissprot - O75934
Ensembl - ENSG00000116752
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 bcas2ENSDARG00000043631Danio rerio
 BCAS2ENSGALG00000002002Gallus gallus
 Bcas2ENSMUSG00000005687Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR008409  Pre-mRNA-splicing factor SPF27


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000375 RNA splicing, via transesterification reactions TAS
 biological_processGO:0000398 mRNA splicing, via spliceosome TAS
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0008380 RNA splicing TAS
 cellular_componentGO:0000974 Prp19 complex IBA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0005662 DNA replication factor A complex IDA
 cellular_componentGO:0005681 spliceosomal complex IDA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0005813 centrosome IDA
 cellular_componentGO:0016607 nuclear speck IDA
 cellular_componentGO:0071007 U2-type catalytic step 2 spliceosome IDA
 cellular_componentGO:0071011 precatalytic spliceosome IBA
 cellular_componentGO:0071013 catalytic step 2 spliceosome IBA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
mRNA Splicing - Major Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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