ENSGALG00000002002


Gallus gallus

Features
Gene ID: ENSGALG00000002002
  
Biological name :BCAS2
  
Synonyms : BCAS2 / BCAS2, pre-mRNA processing factor
  
Possible biological names infered from orthology : breast carcinoma amplified sequence 2 / O75934 / Q9D287
  
Species: Gallus gallus
  
Chr. number: 26
Strand: -1
Band:
Gene start: 3869908
Gene end: 3872919
  
Corresponding Affymetrix probe sets: Gga.11402.1.S1_at (Chicken Array)   Gga.5931.1.S1_s_at (Chicken Array)   Gga.5931.2.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000003113
NCBI entrez gene - 419884     See in Manteia.
RefSeq - NM_001257295
RefSeq Peptide - NP_001244224
swissprot - E1BTS4
Ensembl - ENSGALG00000002002
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 bcas2ENSDARG00000043631Danio rerio
 BCAS2ENSG00000116752Homo sapiens
 Bcas2ENSMUSG00000005687Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR008409  Pre-mRNA-splicing factor SPF27


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006397 mRNA processing IEA
 cellular_componentGO:0000974 Prp19 complex IBA
 cellular_componentGO:0005662 DNA replication factor A complex IEA
 cellular_componentGO:0005681 spliceosomal complex IEA
 cellular_componentGO:0005813 centrosome IEA
 cellular_componentGO:0016607 nuclear speck IEA
 cellular_componentGO:0071007 U2-type catalytic step 2 spliceosome IEA
 cellular_componentGO:0071011 precatalytic spliceosome IBA
 cellular_componentGO:0071013 catalytic step 2 spliceosome IBA


Pathways (from Reactome)
Pathway description
mRNA Splicing - Major Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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