ENSG00000118156


Homo sapiens

Features
Gene ID: ENSG00000118156
  
Biological name :ZNF541
  
Synonyms : Q9H0D2 / zinc finger protein 541 / ZNF541
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 19
Strand: -1
Band: q13.33
Gene start: 47520685
Gene end: 47555856
  
Corresponding Affymetrix probe sets: 232604_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000471665
Ensembl peptide - ENSP00000263351
Ensembl peptide - ENSP00000313258
Ensembl peptide - ENSP00000375770
NCBI entrez gene - 84215     See in Manteia.
RefSeq - XM_017027351
RefSeq - XM_011527370
RefSeq - XM_011527371
RefSeq - XM_011527372
RefSeq - XM_011527373
RefSeq - XM_011527374
RefSeq - NM_001277075
RefSeq - XM_005259311
RefSeq - XM_005259314
RefSeq - XM_011527367
RefSeq - XM_011527368
RefSeq - XM_011527369
RefSeq Peptide - NP_001264004
swissprot - H7BXG6
swissprot - M0R167
swissprot - A0A075B6F0
swissprot - Q9H0D2
Ensembl - ENSG00000118156
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 znf541ENSDARG00000052188Danio rerio
 Q0GGX2ENSMUSG00000078796Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q96PN7 / TRERF1 / transcriptional regulating factor 1ENSG0000012449620
Q6PJG2 / ELMSAN1 / ELM2 and Myb/SANT domain containing 1ENSG0000015603020


Protein motifs (from Interpro)
Interpro ID Name
 IPR000949  ELM2 domain
 IPR001005  SANT/Myb domain
 IPR009057  Homeobox-like domain superfamily
 IPR013087  Zinc finger C2H2-type
 IPR017884  SANT domain
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IBA
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0007283 spermatogenesis IEA
 biological_processGO:0030154 cell differentiation IEA
 cellular_componentGO:0000118 histone deacetylase complex IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005667 transcription factor complex IBA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding ISM
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IBA
 molecular_functionGO:0008134 transcription factor binding IBA
 molecular_functionGO:0044212 transcription regulatory region DNA binding IBA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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