ENSG00000156030


Homo sapiens

Features
Gene ID: ENSG00000156030
  
Biological name :ELMSAN1
  
Synonyms : ELM2 and Myb/SANT domain containing 1 / ELMSAN1 / Q6PJG2
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 14
Strand: -1
Band: q24.3
Gene start: 73715122
Gene end: 73790285
  
Corresponding Affymetrix probe sets: 225980_at (Human Genome U133 Plus 2.0 Array)   235430_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000377634
Ensembl peptide - ENSP00000407767
Ensembl peptide - ENSP00000402380
Ensembl peptide - ENSP00000401344
Ensembl peptide - ENSP00000400871
Ensembl peptide - ENSP00000286523
NCBI entrez gene - 91748     See in Manteia.
RefSeq - XM_005268206
RefSeq - NM_001043318
RefSeq - NM_194278
RefSeq - XM_005268204
RefSeq - XM_005268205
RefSeq Peptide - NP_001036783
RefSeq Peptide - NP_919254
swissprot - A0A1C7CYX1
swissprot - A0A0A0MSU2
swissprot - A0A024R689
swissprot - Q6PJG2
swissprot - H7C1L3
swissprot - C9JYU7
Ensembl - ENSG00000156030
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 elmsan1aENSDARG00000011445Danio rerio
 elmsan1bENSDARG00000053864Danio rerio
 ELMSAN1ENSGALG00000009282Gallus gallus
 Elmsan1ENSMUSG00000042507Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q9H0D2 / ZNF541 / zinc finger protein 541ENSG0000011815626
Q96PN7 / TRERF1 / transcriptional regulating factor 1ENSG0000012449624


Protein motifs (from Interpro)
Interpro ID Name
 IPR000949  ELM2 domain
 IPR001005  SANT/Myb domain
 IPR009057  Homeobox-like domain superfamily
 IPR013087  Zinc finger C2H2-type
 IPR017884  SANT domain
 IPR035500  Nuclear hormone receptor-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IBA
 cellular_componentGO:0000118 histone deacetylase complex IBA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005667 transcription factor complex IBA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding ISM
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IBA
 molecular_functionGO:0008134 transcription factor binding IBA
 molecular_functionGO:0044212 transcription regulatory region DNA binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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