ENSGALG00000009282


Gallus gallus

Features
Gene ID: ENSGALG00000009282
  
Biological name :ELMSAN1
  
Synonyms : ELM2 and Myb/SANT domain containing 1 / ELMSAN1
  
Possible biological names infered from orthology : Q6PJG2
  
Species: Gallus gallus
  
Chr. number: 5
Strand: 1
Band:
Gene start: 26124345
Gene end: 26142266
  
Corresponding Affymetrix probe sets: Gga.16980.1.S1_at (Chicken Array)   GgaAffx.20510.2.S1_s_at (Chicken Array)   GgaAffx.5849.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000015086
NCBI entrez gene - 423245     See in Manteia.
RefSeq - XM_004941658
RefSeq - XM_004941659
RefSeq - XM_015287096
swissprot - F1P4S4
Ensembl - ENSGALG00000009282
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 elmsan1aENSDARG00000011445Danio rerio
 elmsan1bENSDARG00000053864Danio rerio
 Q6PJG2ENSG00000156030Homo sapiens
 Elmsan1ENSMUSG00000042507Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TRERF1 / transcriptional regulating factor 1 / Q96PN7*ENSGALG0000000989624


Protein motifs (from Interpro)
Interpro ID Name
 IPR000949  ELM2 domain
 IPR001005  SANT/Myb domain
 IPR009057  Homeobox-like domain superfamily
 IPR017884  SANT domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IBA
 cellular_componentGO:0000118 histone deacetylase complex IBA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005667 transcription factor complex IBA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IBA
 molecular_functionGO:0008134 transcription factor binding IBA
 molecular_functionGO:0044212 transcription regulatory region DNA binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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