ENSMUSG00000042507


Mus musculus

Features
Gene ID: ENSMUSG00000042507
  
Biological name :Elmsan1
  
Synonyms : ELM2 and Myb/SANT domain containing 1 / Elmsan1
  
Possible biological names infered from orthology : Q6PJG2
  
Species: Mus musculus
  
Chr. number: 12
Strand: -1
Band: D1
Gene start: 84149176
Gene end: 84218881
  
Corresponding Affymetrix probe sets: 10401428 (MoGene1.0st)   1439085_at (Mouse Genome 430 2.0 Array)   1444107_at (Mouse Genome 430 2.0 Array)   1456894_at (Mouse Genome 430 2.0 Array)   1457798_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000105923
Ensembl peptide - ENSMUSP00000152853
Ensembl peptide - ENSMUSP00000048120
NCBI entrez gene - 238317     See in Manteia.
MGI - MGI:2685106
RefSeq - NM_001163502
RefSeq - NM_001163501
RefSeq - XM_006515843
RefSeq Peptide - NP_001156973
RefSeq Peptide - NP_001156974
swissprot - E9Q2I4
swissprot - A0A1Y7VP67
Ensembl - ENSMUSG00000042507
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 elmsan1aENSDARG00000011445Danio rerio
 elmsan1bENSDARG00000053864Danio rerio
 ELMSAN1ENSGALG00000009282Gallus gallus
 Q6PJG2ENSG00000156030Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q0GGX2 / Zfp541 / zinc finger protein 541 / Q9H0D2* / ZNF541*ENSMUSG0000007879626


Protein motifs (from Interpro)
Interpro ID Name
 IPR000949  ELM2 domain
 IPR001005  SANT/Myb domain
 IPR009057  Homeobox-like domain superfamily
 IPR013087  Zinc finger C2H2-type
 IPR017884  SANT domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IBA
 cellular_componentGO:0000118 histone deacetylase complex IBA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm ISO
 cellular_componentGO:0005667 transcription factor complex IBA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IBA
 molecular_functionGO:0008134 transcription factor binding IBA
 molecular_functionGO:0044212 transcription regulatory region DNA binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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