ENSG00000120708


Homo sapiens

Features
Gene ID: ENSG00000120708
  
Biological name :TGFBI
  
Synonyms : Q15582 / TGFBI / transforming growth factor beta induced
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 5
Strand: 1
Band: q31.1
Gene start: 136028895
Gene end: 136063818
  
Corresponding Affymetrix probe sets: 201506_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000423935
Ensembl peptide - ENSP00000426589
Ensembl peptide - ENSP00000474155
Ensembl peptide - ENSP00000427137
Ensembl peptide - ENSP00000416330
Ensembl peptide - ENSP00000421440
Ensembl peptide - ENSP00000421540
Ensembl peptide - ENSP00000423871
NCBI entrez gene - 7045     See in Manteia.
OMIM - 601692
RefSeq - NM_000358
RefSeq Peptide - NP_000349
swissprot - H0Y8L3
swissprot - H0Y8M8
swissprot - H0Y9D7
swissprot - H0YAB8
swissprot - H0YAH8
swissprot - Q15582
swissprot - D6RBX4
swissprot - S4R3C6
swissprot - A0A0S2Z4Q2
Ensembl - ENSG00000120708
  
Related genetic diseases (OMIM): 607541 - Corneal dystrophy, Avellino type, 607541
  121900 - Corneal dystrophy, Groenouw type I, 121900
  608470 - Corneal dystrophy, Reis-Bucklers type, 608470
  602082 - Corneal dystrophy, Thiel-Behnke type, 602082
  121820 - Corneal dystrophy, epithelial basement membrane, 121820
  122200 - Corneal dystrophy, lattice type I, 122200
  608471 - Corneal dystrophy, lattice type IIIA, 608471
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tgfbiENSDARG00000071586Danio rerio
 TGFBIENSGALG00000029429Gallus gallus
 TgfbiENSMUSG00000035493Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
POSTN / Q15063 / periostinENSG0000013311044


Protein motifs (from Interpro)
Interpro ID Name
 IPR000782  FAS1 domain
 IPR011489  EMI domain
 IPR016666  TGF beta-induced protein/periostin
 IPR032954  Transforming growth factor-beta-induced protein ig-h3
 IPR036378  FAS1 domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001525 angiogenesis IEP
 biological_processGO:0002062 chondrocyte differentiation IEA
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007162 negative regulation of cell adhesion TAS
 biological_processGO:0007601 visual perception TAS
 biological_processGO:0008283 cell proliferation IEA
 biological_processGO:0030198 extracellular matrix organization IBA
 biological_processGO:0044267 cellular protein metabolic process TAS
 biological_processGO:0050896 response to stimulus IEA
 cellular_componentGO:0005576 extracellular region IDA
 cellular_componentGO:0005604 basement membrane IEA
 cellular_componentGO:0005615 extracellular space TAS
 cellular_componentGO:0005802 trans-Golgi network IDA
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0031012 extracellular matrix ISS
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0005178 integrin binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0005518 collagen binding IEA
 molecular_functionGO:0050840 extracellular matrix binding IEA


Pathways (from Reactome)
Pathway description
Amyloid fiber formation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000486 Strabismus "Strabismus (also known as squint) is a condition in which the eyes are not properly aligned with each other." [HPO:curators]
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 HP:0000495 Recurrent corneal erosions "The presence of recurrent corneal epithelial erosions. Although most corneal epithelial defects heal quickly, some may show recurrent ulcerations." [HPO:curators]
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 HP:0000505 Impaired vision 
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 HP:0000518 Cataract "A cataract is an opacity or clouding that develops in the crystalline `lens` (FMA:58241) of the eye or in its `capsule` (FMA:58881)." [HPO:probinson]
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 HP:0000529 Progressive visual loss 
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 HP:0000559 Corneal scarring 
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 HP:0000613 Photophobia "Excessive sensitivity to light with the sensation of discomfort or pain in the eyes due to exposure to bright light." [HPO:curators]
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 HP:0001131 Corneal dystrophy 
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 HP:0001149 Lattice corneal dystrophy "The presence of fine, branching linear opacities in Bowman s layer in the central area that may spread to the periphery in the clinical course. The deep corneal stroma may be involved but the process does not reach Descemet s membrane. Recurrent corneal erosion may occur. Histologic examination reveals amyloid deposits in the collagen fibers of the cornea." [HPO:curators]
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 HP:0007663 Decreased central vision 
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 HP:0007690 Map-dot-fingerprint corneal dystrophy 
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 HP:0007755 Juvenile epithelial corneal dystrophy 
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 HP:0007759 Corneal opacities, not impairing visual acuity 
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 HP:0007802 Granular corneal dystrophy "The presence of central, fine, whitish granular lesions in the stroma of the cornea. This type of corneal dystrophy is usually asymptomatic and begins in childhood and shows a slow progression. Later in the course, the corneal epithelium and Bowman s layer may be affected. Histologically, the cornea shows a uniform deposition of hyaline material." [HPO:curators]
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 HP:0007809 Punctate corneal dystrophy 
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 HP:0007827 Nodular corneal dystrophy 
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 HP:0200020 Corneal erosions "Erosions or Abbrasions of the cornea s outermost layer of epithelial cells." [HPO:sdoelken]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000120708 TGFBI / Q15582 / transforming growth factor beta induced  / -






 

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