ENSG00000122786


Homo sapiens

Features
Gene ID: ENSG00000122786
  
Biological name :CALD1
  
Synonyms : CALD1 / caldesmon 1 / Q05682
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 7
Strand: 1
Band: q33
Gene start: 134744252
Gene end: 134970728
  
Corresponding Affymetrix probe sets: 201615_x_at (Human Genome U133 Plus 2.0 Array)   201616_s_at (Human Genome U133 Plus 2.0 Array)   201617_x_at (Human Genome U133 Plus 2.0 Array)   205525_at (Human Genome U133 Plus 2.0 Array)   212077_at (Human Genome U133 Plus 2.0 Array)   214880_x_at (Human Genome U133 Plus 2.0 Array)   215198_s_at (Human Genome U133 Plus 2.0 Array)   215199_at (Human Genome U133 Plus 2.0 Array)   231881_at (Human Genome U133 Plus 2.0 Array)   235834_at (Human Genome U133 Plus 2.0 Array)   243084_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000394715
Ensembl peptide - ENSP00000395710
Ensembl peptide - ENSP00000419673
Ensembl peptide - ENSP00000416611
Ensembl peptide - ENSP00000411476
Ensembl peptide - ENSP00000407522
Ensembl peptide - ENSP00000401988
Ensembl peptide - ENSP00000398826
Ensembl peptide - ENSP00000354513
Ensembl peptide - ENSP00000354826
Ensembl peptide - ENSP00000376826
Ensembl peptide - ENSP00000390926
Ensembl peptide - ENSP00000393621
NCBI entrez gene - 800     See in Manteia.
OMIM - 114213
RefSeq - XM_017012654
RefSeq - NM_004342
RefSeq - NM_033138
RefSeq - NM_033139
RefSeq - NM_033140
RefSeq - NM_033157
RefSeq - XM_017012650
RefSeq - XM_017012651
RefSeq - XM_017012652
RefSeq - XM_017012653
RefSeq Peptide - NP_004333
RefSeq Peptide - NP_149129
RefSeq Peptide - NP_149130
RefSeq Peptide - NP_149131
RefSeq Peptide - NP_149347
swissprot - C9J813
swissprot - A0A140VKA0
swissprot - F8WE61
swissprot - C9JE79
swissprot - E9PGZ1
swissprot - E7EX44
swissprot - C9JEK3
swissprot - Q05682
Ensembl - ENSG00000122786
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 cald1bENSDARG00000086391Danio rerio
 CALD1ENSGALG00000033471Gallus gallus
 Cald1ENSMUSG00000029761Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR006017  Caldesmon
 IPR006018  Caldesmon/lymphocyte specific protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006936 muscle contraction TAS
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0005856 cytoskeleton TAS
 cellular_componentGO:0005886 plasma membrane IDA
 cellular_componentGO:0015629 actin cytoskeleton IDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0030016 myofibril IEA
 cellular_componentGO:0030478 actin cap IEA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IDA
 molecular_functionGO:0003779 actin binding TAS
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0005516 calmodulin binding TAS
 molecular_functionGO:0005523 tropomyosin binding TAS
 molecular_functionGO:0017022 myosin binding IEA
 molecular_functionGO:0045296 cadherin binding IDA


Pathways (from Reactome)
Pathway description
Smooth Muscle Contraction


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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