ENSG00000124205


Homo sapiens

Features
Gene ID: ENSG00000124205
  
Biological name :EDN3
  
Synonyms : EDN3 / endothelin 3 / P14138
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 20
Strand: 1
Band: q13.32
Gene start: 59300427
Gene end: 59325992
  
Corresponding Affymetrix probe sets: 208399_s_at (Human Genome U133 Plus 2.0 Array)   217154_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000493472
Ensembl peptide - ENSP00000311854
Ensembl peptide - ENSP00000337128
Ensembl peptide - ENSP00000360064
Ensembl peptide - ENSP00000360067
Ensembl peptide - ENSP00000379015
NCBI entrez gene - 1908     See in Manteia.
OMIM - 131242
RefSeq - XM_011528655
RefSeq - NM_001302455
RefSeq - NM_001302456
RefSeq - NM_207032
RefSeq - NM_207033
RefSeq - NM_207034
RefSeq - XM_005260312
RefSeq - XM_005260313
RefSeq - XM_006723734
RefSeq Peptide - NP_001289384
RefSeq Peptide - NP_996915
RefSeq Peptide - NP_996916
RefSeq Peptide - NP_996917
RefSeq Peptide - NP_001289385
swissprot - P14138
swissprot - Q4FAT2
Ensembl - ENSG00000124205
  
Related genetic diseases (OMIM): 209880 - Central hypoventilation syndrome, congenital, 209880
  613265 - Waardenburg syndrome, type 4B, 613265
  613712 - {Hirschsprung disease, susceptibility to, 4}, 613712
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CR855375.3ENSDARG00000109591Danio rerio
 edn3bENSDARG00000086669Danio rerio
 EDN3ENSGALG00000040880Gallus gallus
 Edn3ENSMUSG00000027524Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
EDN1 / P05305 / endothelin 1ENSG0000007840125
EDN2 / P20800 / endothelin 2ENSG0000012712923


Protein motifs (from Interpro)
Interpro ID Name
 IPR001928  Endothelin-like toxin
 IPR019764  Endothelin-like toxin, conserved site
 IPR020475  Endothelin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001755 neural crest cell migration IEA
 biological_processGO:0002690 positive regulation of leukocyte chemotaxis IDA
 biological_processGO:0003100 regulation of systemic arterial blood pressure by endothelin IDA
 biological_processGO:0006874 cellular calcium ion homeostasis IEA
 biological_processGO:0007165 signal transduction TAS
 biological_processGO:0007166 cell surface receptor signaling pathway IDA
 biological_processGO:0007186 G-protein coupled receptor signaling pathway TAS
 biological_processGO:0007267 cell-cell signaling TAS
 biological_processGO:0007275 multicellular organism development TAS
 biological_processGO:0008015 blood circulation TAS
 biological_processGO:0008284 positive regulation of cell proliferation IDA
 biological_processGO:0010460 positive regulation of heart rate IDA
 biological_processGO:0010468 regulation of gene expression IGI
 biological_processGO:0010469 regulation of signaling receptor activity IEA
 biological_processGO:0010961 cellular magnesium ion homeostasis IEA
 biological_processGO:0014826 vein smooth muscle contraction IDA
 biological_processGO:0019229 regulation of vasoconstriction IEA
 biological_processGO:0030072 peptide hormone secretion IDA
 biological_processGO:0030182 neuron differentiation IEA
 biological_processGO:0030318 melanocyte differentiation IEA
 biological_processGO:0030334 regulation of cell migration IEA
 biological_processGO:0030593 neutrophil chemotaxis IDA
 biological_processGO:0042310 vasoconstriction IDA
 biological_processGO:0043406 positive regulation of MAP kinase activity IDA
 biological_processGO:0045597 positive regulation of cell differentiation IGI
 biological_processGO:0045840 positive regulation of mitotic nuclear division IDA
 biological_processGO:0046887 positive regulation of hormone secretion IDA
 biological_processGO:0048016 inositol phosphate-mediated signaling IDA
 biological_processGO:0048070 regulation of developmental pigmentation IEA
 biological_processGO:0050880 regulation of blood vessel size IEA
 biological_processGO:1901381 positive regulation of potassium ion transmembrane transport IEA
 cellular_componentGO:0005576 extracellular region TAS
 cellular_componentGO:0005615 extracellular space IDA
 cellular_componentGO:0005622 intracellular IEA
 molecular_functionGO:0005102 signaling receptor binding TAS
 molecular_functionGO:0005179 hormone activity IDA
 molecular_functionGO:0031708 endothelin B receptor binding IPI


Pathways (from Reactome)
Pathway description
Peptide ligand-binding receptors
G alpha (q) signalling events


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000153 Abnormality of the mouth "An abnormality of the `mouth` (FMA:49184)." [HPO:probinson]
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 HP:0000358 Posteriorly rotated ears "A type of `abnormal location of the ears` (HP:0000357) in which the position of the ears is characterized by posterior rotation (the superior part of the ears is rotated towards the back of the head, and the inferior part of the ears towards the front)." [HPO:probinson]
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 HP:0000365 Hearing loss 
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 HP:0000369 Low-set ears "Low-set ears are defined to be set below an arbitrary line drawn between the lateral canthus of the eye and the occipital protruberance." [HPO:curators]
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 HP:0000407 Hearing loss, sensorineural "Hearing loss caused by damage or dysfunction of the auditory nerve (cranial nerve VIII)." [HPO:curators]
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 HP:0000426 Prominent nasal bridge 
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 HP:0000430 Hypoplastic nasal alae "Thinned, deficient, or excessively arched `ala nasi` (FMA:59519)." [pmid:19152422]
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 HP:0000431 Broad nasal bridge "Increased horizontal dimension of the upper, bony part of the nose." [HPO:curators]
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 HP:0000494 Downward slanting palpebral fissures 
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 HP:0000504 Abnormality of vision "Abnormality of eyesight (visual perception)." [HPO:curators]
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 HP:0000506 Telecanthus "An abnormally increased distance between the medial canthi (angle between eyelids) of the eyelids." [HPO:curators]
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 HP:0000635 Blue irides 
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 HP:0000664 Synophrys "Fusion of the left and right `eyebrow` (FMA:54237)." [HPO:probinson]
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 HP:0000975 Hyperhidrosis "An abnormally increased perspiration." [HPO:probinson]
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 HP:0001053 Hypopigmented skin patches 
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 HP:0001100 Heterochromia iridis "Heterochromia iridis is a difference in the color of the iris in the two eyes." [HPO:curators]
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 HP:0001103 Abnormality of the macula 
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 HP:0001181 Adducted thumbs 
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 HP:0001249 Mental retardation 
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001252 Muscular hypotonia "Muscular hypotonia is an abnormally low muscle tone (the amount of tension or resistance to movement in a muscle), often involving reduced muscle strength. Hypotonia is characterized by a diminished resistance to passive stretching." [HPO:curators]
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 HP:0001341 Olfactory lobe agenesis 
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 HP:0001425 Heterogeneous 
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 HP:0001531 Failure to thrive in infancy 
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 HP:0001626 Abnormality of the cardiovascular system "Any abnormality of the heart or vasculature." [HPO:curators]
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 HP:0001824 Weight loss 
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 HP:0002014 Diarrhea 
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 HP:0002017 Nausea and vomiting 
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 HP:0002019 Constipation 
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 HP:0002027 Abdominal pain 
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 HP:0002093 Respiratory insufficiency 
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 HP:0002211 White forelock 
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 HP:0002216 Premature graying of hair 
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 HP:0002226 White eyebrows 
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 HP:0002227 White eyelashes 
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 HP:0002251 Congenital megacolon "An abnormality resulting from a lack of intestinal ganglion cells (i.e., an aganglionic section of bowel) that results in bowel obstruction with enlargement of the colon." [HPO:curators]
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 HP:0002791 Hypoventilation 
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 HP:0003005 Ganglioneuroma 
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 HP:0004322 Decreased body height "A height below that which is expected according to age and gender norms. Although there is no universally accepted definition of short stature, many refer to "short stature" as height more than 2 standard deviations below the mean for age and gender (or below the 3rd percentile for age and gender dependent norms)." [HPO:curators]
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 HP:0004370 Abnormality of temperature regulation 
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 HP:0005214 Intestinal obstruction 
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 HP:0006747 Ganglioneuroblastoma 
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 HP:0007110 Central hypoventilation 
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 HP:0007703 Abnormal retinal pigmentation 
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 HP:0011968 Feeding difficulties "Impaired ability to eat related to problems gathering food and getting ready to suck, chew, or swallow it." [ISCA:eriggs]
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 HP:0100031 Neoplasm of the thyroid gland "The presence of a `neoplasm` (MPATH:218) of the `thyroid gland` (FMA:9603)." [HPO:probinson]
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 HP:0100543 Cognitive impairment "Abnormality in the process of thought including the ability to process information." [HPO:sdoelken]
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 HP:0100806 Sepsis 
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 HP:0200008 Multiple intestinal polyps 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000136160 EDNRB / P24530 / endothelin receptor type B  / reaction / complex
 ENSG00000151617 EDNRA / P25101 / endothelin receptor type A  / complex / reaction
 ENSG00000197993 KEL / P23276 / Kell blood group, metallo-endopeptidase  / reaction
 ENSG00000047597 XK / P51811 / X-linked Kx blood group  / reaction






 

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