ENSG00000124232


Homo sapiens

Features
Gene ID: ENSG00000124232
  
Biological name :RBPJL
  
Synonyms : Q9UBG7 / RBPJL / recombination signal binding protein for immunoglobulin kappa J region like
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 20
Strand: 1
Band: q13.12
Gene start: 45306851
Gene end: 45317824
  
Corresponding Affymetrix probe sets: 221377_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000483978
Ensembl peptide - ENSP00000341243
Ensembl peptide - ENSP00000361826
Ensembl peptide - ENSP00000361828
NCBI entrez gene - 11317     See in Manteia.
OMIM - 616104
RefSeq - XM_011528523
RefSeq - NM_001281448
RefSeq - NM_001281449
RefSeq - NM_014276
RefSeq - XM_011528521
RefSeq - XM_011528522
RefSeq Peptide - NP_055091
RefSeq Peptide - NP_001268377
RefSeq Peptide - NP_001268378
swissprot - Q5QPV1
swissprot - Q9UBG7
swissprot - A0A087X185
Ensembl - ENSG00000124232
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rbpjlENSDARG00000074148Danio rerio
 RBPJLENSGALG00000003952Gallus gallus
 RbpjlENSMUSG00000017007Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RBPJ / Q06330 / recombination signal binding protein for immunoglobulin kappa J regionENSG0000016821447


Protein motifs (from Interpro)
Interpro ID Name
 IPR008967  p53-like transcription factor, DNA-binding
 IPR013783  Immunoglobulin-like fold
 IPR014756  Immunoglobulin E-set
 IPR015350  Beta-trefoil DNA-binding domain
 IPR015351  RBP-J/Cbf11/Cbf12, DNA binding
 IPR036358  Beta-trefoil domain superfamily
 IPR037095  RBP-J/Cbf11/Cbf12, DNA binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0006366 transcription by RNA polymerase II IEA
 biological_processGO:0007165 signal transduction TAS
 biological_processGO:0045893 positive regulation of transcription, DNA-templated IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005667 transcription factor complex IEA
 molecular_functionGO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding IEA
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding NAS
 molecular_functionGO:0000982 transcription factor activity, RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0001228 transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003682 chromatin binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity TAS


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr