ENSGALG00000003952


Gallus gallus

Features
Gene ID: ENSGALG00000003952
  
Biological name :RBPJL
  
Synonyms : RBPJL / recombination signal binding protein for immunoglobulin kappa J region like
  
Possible biological names infered from orthology : O08674 / Q9UBG7
  
Species: Gallus gallus
  
Chr. number: 20
Strand: -1
Band:
Gene start: 5294048
Gene end: 5306816
  
Corresponding Affymetrix probe sets: Gga.13406.2.S1_a_at (Chicken Array)   Gga.5380.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000044380
Ensembl peptide - ENSGALP00000006289
NCBI entrez gene - 419185     See in Manteia.
RefSeq - XM_417363
RefSeq - XM_004947026
RefSeq - XM_015296737
swissprot - F1NYH2
swissprot - A0A1D5NVK5
Ensembl - ENSGALG00000003952
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rbpjlENSDARG00000074148Danio rerio
 RBPJLENSG00000124232Homo sapiens
 RbpjlENSMUSG00000017007Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RBPJ / recombination signal binding protein for immunoglobulin kappa J region / P31266* / Q06330* / Recombining binding protein suppressor of hairless *ENSGALG0000001436542


Protein motifs (from Interpro)
Interpro ID Name
 IPR008967  p53-like transcription factor, DNA-binding
 IPR013783  Immunoglobulin-like fold
 IPR014756  Immunoglobulin E-set
 IPR015350  Beta-trefoil DNA-binding domain
 IPR015351  RBP-J/Cbf11/Cbf12, DNA binding


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0006366 transcription by RNA polymerase II IEA
 biological_processGO:0045893 positive regulation of transcription, DNA-templated IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005667 transcription factor complex IEA
 molecular_functionGO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding IEA
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0000982 transcription factor activity, RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0001228 transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003682 chromatin binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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