ENSG00000126461


Homo sapiens

Features
Gene ID: ENSG00000126461
  
Biological name :SCAF1
  
Synonyms : Q9H7N4 / SCAF1 / SR-related CTD associated factor 1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 19
Strand: 1
Band: q13.33
Gene start: 49642125
Gene end: 49658642
  
Corresponding Affymetrix probe sets: 225500_x_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000353769
Ensembl peptide - ENSP00000472276
Ensembl peptide - ENSP00000472649
Ensembl peptide - ENSP00000473210
NCBI entrez gene - 58506     See in Manteia.
OMIM - 617264
RefSeq - XM_017027083
RefSeq - NM_021228
RefSeq - XM_005259122
RefSeq - XM_011527194
RefSeq Peptide - NP_067051
swissprot - Q9H7N4
swissprot - M0R2L3
swissprot - M0R3G4
swissprot - M0R232
Ensembl - ENSG00000126461
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 scaf1ENSDARG00000054010Danio rerio
 Scaf1ENSMUSG00000038406Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PHRF1 / Q9P1Y6 / PHD and ring finger domains 1ENSG0000007004724
Q99590 / SCAF11 / SR-related CTD associated factor 11ENSG0000013921816


Protein motifs (from Interpro)
Interpro ID Name
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006366 transcription by RNA polymerase II IEA
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0008380 RNA splicing IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0019904 protein domain specific binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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