ENSG00000070047


Homo sapiens

Features
Gene ID: ENSG00000070047
  
Biological name :PHRF1
  
Synonyms : PHD and ring finger domains 1 / PHRF1 / Q9P1Y6
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 11
Strand: 1
Band: p15.5
Gene start: 576486
Gene end: 612222
  
Corresponding Affymetrix probe sets: 234952_s_at (Human Genome U133 Plus 2.0 Array)   237379_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000435360
Ensembl peptide - ENSP00000388589
Ensembl peptide - ENSP00000410626
Ensembl peptide - ENSP00000431870
Ensembl peptide - ENSP00000264555
NCBI entrez gene - 57661     See in Manteia.
OMIM - 611780
RefSeq - XM_011520237
RefSeq - NM_001286581
RefSeq - NM_001286582
RefSeq - NM_001286583
RefSeq - NM_020901
RefSeq - XM_005253025
RefSeq - XM_005253027
RefSeq - XM_011520236
RefSeq Peptide - NP_001273510
RefSeq Peptide - NP_001273512
RefSeq Peptide - NP_065952
RefSeq Peptide - NP_001273511
swissprot - A0A024RCA1
swissprot - E9PJ24
swissprot - F8WEF5
swissprot - Q9P1Y6
Ensembl - ENSG00000070047
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 phrf1ENSDARG00000075252Danio rerio
 PHRF1ENSGALG00000006873Gallus gallus
 Phrf1ENSMUSG00000038611Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SCAF1 / Q9H7N4 / SR-related CTD associated factor 1ENSG0000012646119
Q99590 / SCAF11 / SR-related CTD associated factor 11ENSG0000013921817


Protein motifs (from Interpro)
Interpro ID Name
 IPR001841  Zinc finger, RING-type
 IPR001965  Zinc finger, PHD-type
 IPR011011  Zinc finger, FYVE/PHD-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR017907  Zinc finger, RING-type, conserved site
 IPR019786  Zinc finger, PHD-type, conserved site
 IPR019787  Zinc finger, PHD-finger


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006366 transcription by RNA polymerase II IEA
 biological_processGO:0006397 mRNA processing IEA
 cellular_componentGO:0016020 membrane HDA
 molecular_functionGO:0019904 protein domain specific binding IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0070063 RNA polymerase binding ISS


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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