ENSG00000126856


Homo sapiens

Features
Gene ID: ENSG00000126856
  
Biological name :PRDM7
  
Synonyms : PRDM7 / PR/SET domain 7 / Q9NQW5
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 16
Strand: -1
Band: q24.3
Gene start: 90056566
Gene end: 90092072
  
Corresponding Affymetrix probe sets: 224228_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000496449
Ensembl peptide - ENSP00000396732
Ensembl peptide - ENSP00000455390
Ensembl peptide - ENSP00000457667
NCBI entrez gene - 11105     See in Manteia.
OMIM - 609759
RefSeq - XM_017022883
RefSeq - XM_005256274
RefSeq - XM_011522829
RefSeq - XM_011522831
RefSeq - XM_017022882
RefSeq - NM_001098173
RefSeq Peptide - NP_001091643
swissprot - H3BUJ3
swissprot - A4Q9G9
swissprot - Q9NQW5
Ensembl - ENSG00000126856
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PRDM2 / Q13029 / PR/SET domain 2ENSG0000011673115


Protein motifs (from Interpro)
Interpro ID Name
 IPR001214  SET domain
 IPR001909  Krueppel-associated box
 IPR003655  Krueppel-associated box-related
 IPR019041  SSXRD motif
 IPR036051  KRAB domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006325 chromatin organization IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0032259 methylation IEA
 biological_processGO:0034968 histone lysine methylation IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005694 chromosome IEA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding NAS
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0008168 methyltransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0018024 histone-lysine N-methyltransferase activity IEA


Pathways (from Reactome)
Pathway description
Generic Transcription Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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