ENSG00000127990


Homo sapiens

Features
Gene ID: ENSG00000127990
  
Biological name :SGCE
  
Synonyms : O43556 / sarcoglycan epsilon / SGCE
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 7
Strand: -1
Band: q21.3
Gene start: 94524204
Gene end: 94656572
  
Corresponding Affymetrix probe sets: 204688_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000494192
Ensembl peptide - ENSP00000494587
Ensembl peptide - ENSP00000494615
Ensembl peptide - ENSP00000494666
Ensembl peptide - ENSP00000494688
Ensembl peptide - ENSP00000494738
Ensembl peptide - ENSP00000494898
Ensembl peptide - ENSP00000494975
Ensembl peptide - ENSP00000495044
Ensembl peptide - ENSP00000495105
Ensembl peptide - ENSP00000495114
Ensembl peptide - ENSP00000495165
Ensembl peptide - ENSP00000495199
Ensembl peptide - ENSP00000495209
Ensembl peptide - ENSP00000495236
Ensembl peptide - ENSP00000495249
Ensembl peptide - ENSP00000495270
Ensembl peptide - ENSP00000495276
Ensembl peptide - ENSP00000495311
Ensembl peptide - ENSP00000495468
Ensembl peptide - ENSP00000495480
Ensembl peptide - ENSP00000495555
Ensembl peptide - ENSP00000495591
Ensembl peptide - ENSP00000495603
Ensembl peptide - ENSP00000495656
Ensembl peptide - ENSP00000495735
Ensembl peptide - ENSP00000495838
Ensembl peptide - ENSP00000495931
Ensembl peptide - ENSP00000495994
Ensembl peptide - ENSP00000496045
Ensembl peptide - ENSP00000496172
Ensembl peptide - ENSP00000496237
Ensembl peptide - ENSP00000496268
Ensembl peptide - ENSP00000496346
Ensembl peptide - ENSP00000496391
Ensembl peptide - ENSP00000496455
Ensembl peptide - ENSP00000496461
Ensembl peptide - ENSP00000496480
Ensembl peptide - ENSP00000496559
Ensembl peptide - ENSP00000496613
Ensembl peptide - ENSP00000496678
Ensembl peptide - ENSP00000265735
Ensembl peptide - ENSP00000388734
Ensembl peptide - ENSP00000391892
Ensembl peptide - ENSP00000394061
Ensembl peptide - ENSP00000397536
Ensembl peptide - ENSP00000398344
Ensembl peptide - ENSP00000398930
Ensembl peptide - ENSP00000405313
Ensembl peptide - ENSP00000431080
Ensembl peptide - ENSP00000493509
Ensembl peptide - ENSP00000493511
Ensembl peptide - ENSP00000493603
Ensembl peptide - ENSP00000493722
Ensembl peptide - ENSP00000493751
Ensembl peptide - ENSP00000493950
Ensembl peptide - ENSP00000493981
Ensembl peptide - ENSP00000493984
Ensembl peptide - ENSP00000494041
Ensembl peptide - ENSP00000494164
Ensembl peptide - ENSP00000494315
Ensembl peptide - ENSP00000494350
Ensembl peptide - ENSP00000494457
Ensembl peptide - ENSP00000494488
Ensembl peptide - ENSP00000494489
Ensembl peptide - ENSP00000494490
Ensembl peptide - ENSP00000494540
Ensembl peptide - ENSP00000494556
NCBI entrez gene - 8910     See in Manteia.
OMIM - 604149
RefSeq - XM_017012768
RefSeq - NM_001346720
RefSeq - NM_003919
RefSeq - XM_005250675
RefSeq - XM_005250677
RefSeq - XM_011516663
RefSeq - XM_011516664
RefSeq - XM_011516665
RefSeq - XM_011516666
RefSeq - XM_011516667
RefSeq - XM_011516669
RefSeq - XM_017012763
RefSeq - XM_017012764
RefSeq - XM_017012765
RefSeq - XM_017012766
RefSeq - XM_017012767
RefSeq - XM_017012769
RefSeq - NM_001099400
RefSeq - NM_001099401
RefSeq - NM_001301139
RefSeq - NM_001346713
RefSeq - NM_001346715
RefSeq - NM_001346717
RefSeq Peptide - NP_001092871
RefSeq Peptide - NP_001288068
RefSeq Peptide - NP_001333642
RefSeq Peptide - NP_001333644
RefSeq Peptide - NP_001333646
RefSeq Peptide - NP_001333649
RefSeq Peptide - NP_003910
RefSeq Peptide - NP_001092870
swissprot - C9JR67
swissprot - E9PEH6
swissprot - A0A0S2Z4P5
swissprot - H0YC75
swissprot - C9J4J9
swissprot - O43556
swissprot - B7Z2R4
Ensembl - ENSG00000127990
  
Related genetic diseases (OMIM): 159900 - Dystonia-11, myoclonic, 159900
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sgceENSDARG00000012138Danio rerio
 SGCEENSGALG00000009670Gallus gallus
 SgceENSMUSG00000004631Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SGCA / Q16586 / sarcoglycan alphaENSG0000010882336


Protein motifs (from Interpro)
Interpro ID Name
 IPR006644  Dystroglycan-type cadherin-like
 IPR008908  Sarcoglycan alpha/epsilon
 IPR030775  Epsilon-sarcoglycan


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0003012 muscle system process IBA
 biological_processGO:0007160 cell-matrix adhesion TAS
 biological_processGO:0007517 muscle organ development TAS
 biological_processGO:0061024 membrane organization IBA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005794 Golgi apparatus ISS
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0005886 plasma membrane ISS
 cellular_componentGO:0005887 integral component of plasma membrane TAS
 cellular_componentGO:0016010 dystrophin-associated glycoprotein complex IDA
 cellular_componentGO:0016012 sarcoglycan complex IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030425 dendrite IEA
 cellular_componentGO:0032590 dendrite membrane ISS
 cellular_componentGO:0042383 sarcolemma IEA
 cellular_componentGO:0042995 cell projection IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000473 Torticollis 
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 HP:0000716 Depression "A condition characterized by pervasive dysphoric mood, loss of interests, and inability to experience pleasure." [HPO:curators]
Show

 HP:0000722 Obsessive-compulsive disorder 
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 HP:0000739 Anxiety 
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 HP:0000756 Agoraphobia 
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 HP:0001290 Generalized hypotonia "Generalized muscular hypotonia (abnormally low muscle tone)." [HPO:curators]
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 HP:0001336 Myoclonus "Very brief, involuntary random muscular contractions occurring at rest, in response to sensory stimuli, or accompanying voluntary movements." [HPO:curators]
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 HP:0001337 Tremor "An unintentional, oscillating to-and-fro muscle movement." [HPO:curators]
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 HP:0002356 Writer s cramp 
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 HP:0003621 Juvenile onset 
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 HP:0003829 Incomplete penetrance 
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 HP:0010531 Spinal myoclonus "Spinal myoclonus is generally due to a tumor, infection, injury, or degenerative process of the spinal cord, and is characterized by involuntary rhythmic muscle contractions, usually at a rate of more than one per second. Myoclonus occurs synchronously in several muscles and can be increased in severity and frequency by fatigue or stress, but is usually unaffected by sensory stimuli. Spinal myoclonus ceases during sleep or anesthesia." [HPO:curators]
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 HP:0012075 Personality disorder "An abnormality of mental functioning affecting the personality and behavioural tendencies of an individual and characterized by a rigid and unhealthy pattern of thinking and behavior. The definition of a personal disorder implies that the abnormality is not the result of damage or insult to the brain or from another psychiatric disorder." [HPO:probinson]
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 HP:0025269 Panic attack "A sudden episode of intense fear in a situation in which there is no danger or apparent cause. The panic attack is accompanied by symptoms such as palpitations, sweating and chills or hot flushes. There may be a sensation of dyspnea (being out of breath), chest pain, or abdominal distress. Some indiviudals with panic attacks may experience depersonalization, a fear of going crazy, or a fear of dying." []
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 HP:0045084 Limb myoclonus 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr