ENSG00000129250


Homo sapiens

Features
Gene ID: ENSG00000129250
  
Biological name :KIF1C
  
Synonyms : KIF1C / kinesin family member 1C / O43896
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 17
Strand: 1
Band: p13.2
Gene start: 4997948
Gene end: 5028401
  
Corresponding Affymetrix probe sets: 209244_s_at (Human Genome U133 Plus 2.0 Array)   209245_s_at (Human Genome U133 Plus 2.0 Array)   238477_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000320821
Ensembl peptide - ENSP00000458697
NCBI entrez gene - 10749     See in Manteia.
OMIM - 603060
RefSeq - XM_005256424
RefSeq - NM_006612
RefSeq Peptide - NP_006603
swissprot - O43896
swissprot - I3L1B1
Ensembl - ENSG00000129250
  
Related genetic diseases (OMIM): 611302 - Spastic ataxia 2, autosomal recessive, 611302
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 si:ch73-375g18.1ENSDARG00000075024Danio rerio
 Kif1cENSMUSG00000020821Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
KIF1A / Q12756 / kinesin family member 1AENSG0000013029454
KIF1B / O60333 / kinesin family member 1BENSG0000005452352
KIF13A / Q9H1H9 / kinesin family member 13AENSG0000013717734
KIF13B / Q9NQT8 / kinesin family member 13BENSG0000019789234
Q9P2P6 / STARD9 / StAR related lipid transfer domain containing 9ENSG0000015943330
KIF16B / Q96L93 / kinesin family member 16BENSG0000008917728
KIF14 / Q15058 / kinesin family member 14ENSG0000011819327


Protein motifs (from Interpro)
Interpro ID Name
 IPR000253  Forkhead-associated (FHA) domain
 IPR001752  Kinesin motor domain
 IPR008984  SMAD/FHA domain superfamily
 IPR019821  Kinesin motor domain, conserved site
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR027640  Kinesin-like protein
 IPR032405  Kinesin-associated
 IPR036961  Kinesin motor domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006890 retrograde vesicle-mediated transport, Golgi to ER TAS
 biological_processGO:0007018 microtubule-based movement IEA
 biological_processGO:0030705 cytoskeleton-dependent intracellular transport IBA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005783 endoplasmic reticulum TAS
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0005871 kinesin complex IBA
 cellular_componentGO:0005874 microtubule IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003723 RNA binding HDA
 molecular_functionGO:0003774 motor activity IEA
 molecular_functionGO:0003777 microtubule motor activity IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0008017 microtubule binding IEA
 molecular_functionGO:0016887 ATPase activity IBA


Pathways (from Reactome)
Pathway description
COPI-dependent Golgi-to-ER retrograde traffic
Kinesins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000252 Microcephaly "Microcephaly is a neurodevelopmental disorder in which the circumference of the head is more than two standard deviations smaller than the age- and gender-dependent norm." [HPO:curators]
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 HP:0000473 Torticollis 
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 HP:0000666 Nystagmus, horizontal 
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 HP:0000668 Hypodontia "Hypodontia describes a situation when there are fewer than the normal number of teeth, whereby 6 teeth or fewer teeth are missing (oligodontia refers to the condition of missing more than 6 teeth and the congenital absence of all teeth is called anodontia)." [HPO:curators]
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 HP:0001256 Mental retardation, mild "Mild mental retardation is defined as an intelligence quotient (IQ) in the range of 50-69." [HPO:curators]
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 HP:0001257 Spasticity "A motor disorder characterized by a velocity-dependent increase in tonic stretch reflexes with increased muscle tone, exaggerated (hyperexcitable) tendon reflexes." [HPO:curators]
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 HP:0001260 Dysarthria "Dysarthric speech is a general description referring to a neurological speech disorder characterized by poor articulation. Depending on the involved neurological structures, dysarthria may be further classified as spastic, flaccid, ataxic, hyperkinetic and hypokinetic, or mixed." [HPO:curators]
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001272 Cerebellar atrophy 
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 HP:0001310 Dysmetria 
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 HP:0001347 Hyperreflexia "The presence of overactive or overresponsive reflexes." [HPO:curators]
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 HP:0002059 Cerebral atrophy 
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 HP:0002066 Gait ataxia "Impairment of the ability to coordinate the movements required for normal walking." [HPO:curators]
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 HP:0002072 Chorea "Chorea (Greek for dance ) refers to widespread arrhythmic involuntary movements of a forcible, jerky and restless fashion." [HPO:curators]
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 HP:0002080 Intention tremor "An oscillatory cerebellar ataxia that tends to be absent when the limbs are inactive and during the first part of voluntary movement but worsening as the movement continues and greater precision is required (e.g., in touching a target such as the patient s nose or a physician s finger)." [HPO:curators]
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 HP:0002169 Clonus 
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 HP:0002317 Unsteady gait 
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 HP:0002359 Frequent falls 
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 HP:0002380 Fasciculations "Fasciculations are observed as small, local, involuntary muscle contractions (twitching) visible under the skin. Fasciculations result from increased irritability of an axon (which in turn is often a manifestation of disease of a motor neuron). This leads to sporadic discharges of all the muscle fibers controlled by the axon in isolation from other motor units." [HPO:curators]
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 HP:0002395 Lower limb hyperreflexia 
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 HP:0002497 Spastic ataxia 
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 HP:0002500 Abnormality of the cerebral white matter 
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 HP:0002599 Head titubation 
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 HP:0003487 Babinski sign "Upturning of the big toe (and sometimes fanning of the other toes) in response to stimulation of the sole of the foot. If the Babinski sign is present it can indicate damage to the corticospinal tract." [HPO:curators]
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 HP:0003676 Progressive disorder 
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 HP:0003693 Distal amyotrophy "Muscular atrophy affecting muscles in the distal portions of the extremities." [HPO:curators]
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 HP:0004322 Decreased body height "A height below that which is expected according to age and gender norms. Although there is no universally accepted definition of short stature, many refer to "short stature" as height more than 2 standard deviations below the mean for age and gender (or below the 3rd percentile for age and gender dependent norms)." [HPO:curators]
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 HP:0007663 Decreased central vision 
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 HP:0009830 Peripheral neuropathy "Peripheral neuropathy is a general term for any disorder of the peripheral nervous system. The main clinical features used to classify peripheral neuropathy are distribution, type (mainly demyelinating versus mainly axonal), duration, and course." [HPO:curators]
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 HP:0011096 Peripheral demyelination "A loss of myelin from the internode regions along myelinated nerve fibers of the peripheral nervous system." [HPO:probinson]
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 HP:0025357 Erratic myoclonus "A type of myoclonus in which the myoclonias shift from body region to another in a random and asynchronous fashion. Erratic myoclonus can affect the face or limbs, are brief, single or repetitive, very frequent and nearly continuous." []
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 HP:0030051 Tip-toe gait "An abnormal gait pattern characterized by the failue of the heel to contact the floor at the onset of stance during gait." [pmid:24757457]
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 HP:0030187 Titubation "Nodding movement of the head or body." [HPO:probinson, pmid:4821687]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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