ENSG00000130294


Homo sapiens

Features
Gene ID: ENSG00000130294
  
Biological name :KIF1A
  
Synonyms : KIF1A / kinesin family member 1A / Q12756
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 2
Strand: -1
Band: q37.3
Gene start: 240713764
Gene end: 240820308
  
Corresponding Affymetrix probe sets: 203849_s_at (Human Genome U133 Plus 2.0 Array)   203850_s_at (Human Genome U133 Plus 2.0 Array)   225482_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000415367
Ensembl peptide - ENSP00000414613
Ensembl peptide - ENSP00000438388
Ensembl peptide - ENSP00000322791
Ensembl peptide - ENSP00000384231
Ensembl peptide - ENSP00000395443
Ensembl peptide - ENSP00000398686
NCBI entrez gene - 547     See in Manteia.
OMIM - 601255
RefSeq - XM_017004391
RefSeq - XM_011511367
RefSeq - XM_017004383
RefSeq - XM_017004384
RefSeq - XM_017004385
RefSeq - XM_017004386
RefSeq - XM_017004387
RefSeq - XM_017004388
RefSeq - XM_017004389
RefSeq - XM_017004390
RefSeq - NM_001244008
RefSeq - NM_001320705
RefSeq - NM_004321
RefSeq - XM_005247022
RefSeq - XM_005247024
RefSeq - XM_005247027
RefSeq - XM_005247028
RefSeq - XM_006712605
RefSeq - XM_011511364
RefSeq - XM_011511365
RefSeq - XM_011511366
RefSeq Peptide - NP_001307634
RefSeq Peptide - NP_004312
RefSeq Peptide - NP_001230937
swissprot - H7C437
swissprot - F8W8V9
swissprot - Q12756
swissprot - C9JBH1
swissprot - H7C0K6
swissprot - H7C3Y8
Ensembl - ENSG00000130294
  
Related genetic diseases (OMIM): 610357 - Spastic paraplegia 30, autosomal recessive, 610357
  614213 - Neuropathy, hereditary sensory, type IIC, 614213
  614255 - Mental retardation, autosomal dominant 9, 614255
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 kif1aaENSDARG00000061817Danio rerio
 kif1cENSDARG00000062024Danio rerio
 KIF1AENSGALG00000006221Gallus gallus
 Kif1aENSMUSG00000014602Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
KIF1B / O60333 / kinesin family member 1BENSG0000005452371
KIF1C / O43896 / kinesin family member 1CENSG0000012925033
KIF13B / Q9NQT8 / kinesin family member 13BENSG0000019789228
KIF13A / Q9H1H9 / kinesin family member 13AENSG0000013717728
Q9P2P6 / STARD9 / StAR related lipid transfer domain containing 9ENSG0000015943324
KIF16B / Q96L93 / kinesin family member 16BENSG0000008917721
KIF14 / Q15058 / kinesin family member 14ENSG0000011819320


Protein motifs (from Interpro)
Interpro ID Name
 IPR000253  Forkhead-associated (FHA) domain
 IPR001752  Kinesin motor domain
 IPR001849  Pleckstrin homology domain
 IPR008984  SMAD/FHA domain superfamily
 IPR011989  Armadillo-like helical
 IPR011993  PH-like domain superfamily
 IPR019821  Kinesin motor domain, conserved site
 IPR022140  Kinesin-like KIF1-type
 IPR022164  Kinesin-like
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR027640  Kinesin-like protein
 IPR032405  Kinesin-associated
 IPR036961  Kinesin motor domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007018 microtubule-based movement IEA
 biological_processGO:0008089 anterograde axonal transport IEA
 biological_processGO:0022027 interkinetic nuclear migration IEA
 biological_processGO:0098840 protein transport along microtubule IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0005871 kinesin complex IBA
 cellular_componentGO:0005874 microtubule IEA
 cellular_componentGO:0008021 synaptic vesicle IEA
 cellular_componentGO:0030424 axon IEA
 cellular_componentGO:0030425 dendrite IEA
 cellular_componentGO:0043025 neuronal cell body IEA
 cellular_componentGO:0098793 presynapse IEA
 cellular_componentGO:0098794 postsynapse IEA
 cellular_componentGO:1904115 axon cytoplasm IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003774 motor activity IEA
 molecular_functionGO:0003777 microtubule motor activity IEA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0008017 microtubule binding IEA
 molecular_functionGO:0016887 ATPase activity IBA
 molecular_functionGO:0042802 identical protein binding IPI
 molecular_functionGO:0042803 protein homodimerization activity IEA


Pathways (from Reactome)
Pathway description
COPI-dependent Golgi-to-ER retrograde traffic
Kinesins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000174 Abnormality of palate "Any abnormality of the `palate` (FMA:54549), i.e., of roof of the mouth)." [HPO:probinson]
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 HP:0000177 Abnormality of upper lip "An abnormality of the `upper lip` (FMA:59817)." [HPO:probinson]
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 HP:0000194 Open mouth 
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 HP:0000212 Gingival hyperplasia 
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 HP:0000224 Decreased taste sensation 
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 HP:0000238 Hydrocephalus 
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 HP:0000252 Microcephaly "Microcephaly is a neurodevelopmental disorder in which the circumference of the head is more than two standard deviations smaller than the age- and gender-dependent norm." [HPO:curators]
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 HP:0000272 Malar hypoplasia "Underdeveloped midface region." [HPO:curators]
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 HP:0000286 Epicanthus "An epicanthal fold is a semilunar fold of skin that extends from the upper eyelid across the medial canthal area to the lower eyelid." [HPO:curators]
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 HP:0000293 Full cheeks 
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 HP:0000400 Large ears 
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 HP:0000463 Nares, anteverted "Anteriorly-facing nostrils viewed with the head in the Frankfurt horizontal and the eyes of the observer level with the eyes of the subject." [pmid:19152422]
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 HP:0000478 Abnormality of the eyes "Any abnormality of the `eyes` (FMA:54448), including location, spacing, and intraocular abnormalities." [HPO:curators]
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 HP:0000496 Abnormality of eye movement "An abnormality in voluntary or involuntary eye movements or their control." [HPO:probinson]
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 HP:0000570 Abnormality of saccadic eye movements "An `abnormality of eye movement` (HP:0000496) characterized by impairment of fast (saccadic) eye movements." [HPO:probinson]
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 HP:0000572 Visual loss 
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 HP:0000639 Nystagmus "Rhythmic, involuntary oscillations of one or both eyes related to abnormality in fixation, conjugate gaze, or vestibular mechanisms." [HPO:curators]
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 HP:0000648 Optic atrophy 
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 HP:0000762 Decreased nerve conduction velocities 
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 HP:0000970 Anhidrosis "Inability to sweat." [HPO:curators]
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 HP:0000975 Hyperhidrosis "An abnormally increased perspiration." [HPO:probinson]
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 HP:0001069 Hyperhidrosis, episodic 
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 HP:0001182 Tapered fingers 
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 HP:0001249 Mental retardation 
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001251 Ataxia "Ataxia is a nonspecific neurological sign and symptom consisting of gross lack of coordination of muscle movements. Ataxia is caused by dysfunction of one or more parts of the nervous system including the cerebellum, the sensory nervous system, the vestibular system, or the cerebral cortex." [HPO:curators]
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 HP:0001252 Muscular hypotonia "Muscular hypotonia is an abnormally low muscle tone (the amount of tension or resistance to movement in a muscle), often involving reduced muscle strength. Hypotonia is characterized by a diminished resistance to passive stretching." [HPO:curators]
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 HP:0001257 Spasticity "A motor disorder characterized by a velocity-dependent increase in tonic stretch reflexes with increased muscle tone, exaggerated (hyperexcitable) tendon reflexes." [HPO:curators]
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 HP:0001258 Spastic paraplegia 
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001265 Hyporeflexia 
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 HP:0001272 Cerebellar atrophy 
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 HP:0001284 Areflexia 
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 HP:0001290 Generalized hypotonia "Generalized muscular hypotonia (abnormally low muscle tone)." [HPO:curators]
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 HP:0001310 Dysmetria 
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 HP:0001347 Hyperreflexia "The presence of overactive or overresponsive reflexes." [HPO:curators]
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 HP:0001371 Contractures 
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 HP:0001376 Decreased mobility of joints 
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 HP:0001762 Talipes equinovarus "Also called clubfoot typically has 4 main components: inversion and adduction of the forefoot; inversion of the heel and hindfoot; equinus (limitation of extension) of the ankle and subtalar joint; and internal rotation of the leg. Clubfoot is a complex, multifactorial deformity with genetic and intrauterine factors. One popular theory postulates that a clubfoot is a result of intrauterine maldevelopment of the talus that leads to adduction and plantarflexion of the foot. On radiographic projection a clubfoot can be noted as parallel axes of talus and calcaneus." [HPO:curators]
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 HP:0001810 Dystrophic toenails 
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 HP:0001818 Paronychia "The nail disease paronychia is an often-tender bacterial or fungal hand infection or foot infection where the nail and skin meet at the side or the base of a finger or toenail. The infection can start suddenly (acute paronychia) or gradually (chronic paronychia)." [HPO:curators]
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 HP:0001842 Acroosteolysis (feet) 
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 HP:0001939 Metabolism abnormality 
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 HP:0002020 Gastroesophageal reflux 
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 HP:0002059 Cerebral atrophy 
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 HP:0002061 Lower limb spasticity 
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 HP:0002064 Spastic gait 
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 HP:0002119 Ventriculomegaly 
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 HP:0002120 Cerebral cortical atrophy 
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 HP:0002132 Porencephaly 
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 HP:0002205 Recurrent respiratory infections 
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 HP:0002317 Unsteady gait 
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 HP:0002329 Drowsiness 
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 HP:0002395 Lower limb hyperreflexia 
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 HP:0002521 Hypsarrhythmia "Hypsarrhythmia is abnormal interictal high amplitude waves and a background of irregular spikes demonstrated by electroencephalography (EEG)." [HPO:curators]
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 HP:0002540 Inability to walk 
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 HP:0002645 Wormian bones 
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 HP:0002661 Painless fractures due to injury "An increased tendency to fractures following trauma, with fractures occurring without pain." [HPO:curators]
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 HP:0002804 Arthrogryposis multiplex congenita 
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 HP:0002815 Abnormality of the knees "An abnormality of the knee joint or surrounding structures." [HPO:curators]
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 HP:0002839 Sphincter disturbances (bladder) 
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 HP:0002936 Distal sensory impairment 
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 HP:0003028 Abnormality of the ankles 
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 HP:0003103 Abnormality of cortical bone "An abnormality of cortical bone (also known as compact bone), which forms the dense surface of bones." [HPO:curators]
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 HP:0003196 Nasal hypoplasia "Underdevelopment of the `nose` (FMA:46472)." [HPO:probinson]
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 HP:0003202 Amyotrophy "The presence of muscular atrophy (which is also known as amyotrophy)." [HPO:curators]
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 HP:0003272 Abnormality of the hip "An abnormality of the hip joint or the surrounding anatomic region." [HPO:curators]
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 HP:0003307 Hyperlordosis 
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 HP:0003380 Decreased number of myelinated fibers "A loss of myelinated nerve fibers (in general, this finding can be observed on nerve biopsy)." [HPO:curators]
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 HP:0003448 Decreased sensory nerve conduction velocities (NCV) 
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 HP:0003477 Axonal neuropathy 
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 HP:0003487 Babinski sign "Upturning of the big toe (and sometimes fanning of the other toes) in response to stimulation of the sole of the foot. If the Babinski sign is present it can indicate damage to the corticospinal tract." [HPO:curators]
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 HP:0003593 Early onset 
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 HP:0003676 Progressive disorder 
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 HP:0003677 Slow progression 
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 HP:0003693 Distal amyotrophy "Muscular atrophy affecting muscles in the distal portions of the extremities." [HPO:curators]
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 HP:0003828 Variable expressivity 
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 HP:0004322 Decreased body height "A height below that which is expected according to age and gender norms. Although there is no universally accepted definition of short stature, many refer to "short stature" as height more than 2 standard deviations below the mean for age and gender (or below the 3rd percentile for age and gender dependent norms)." [HPO:curators]
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 HP:0004349 Reduced bone mineral density "A reduction of bone mineral density, that is, of the amount of matter per cubic centimeter of bones." [HPO:curators]
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 HP:0004422 Biparietal narrowing "A narrowing of the biparietal diameter (i.e., of the transverse distance between the protuberances of the two parietal bones of the skull)." [HPO:curators]
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 HP:0005930 Abnormality of the epiphyses 
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 HP:0006121 Acral ulceration leading to autoamputation of digits 
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 HP:0006829 Severe muscular hypotonia "A severe degree of muscular hypotonia characterized by markedly reduced muscle tone." [HPO:curators]
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 HP:0006855 Cerebellar vermis atrophy 
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 HP:0007020 Progressive spastic paraplegia 
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 HP:0007141 Sensorimotor neuropathy 
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 HP:0007210 Lower limb hypotrophy 
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 HP:0007340 Lower limb muscle weakness "Weakness of the muscles of the legs." [HPO:curators]
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 HP:0007366 Atrophy/Degeneration affecting the brainstem 
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 HP:0008391 Mildly dystrophic fingernails 
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 HP:0008572 External ear malformation 
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 HP:0008872 Feeding problems in infancy 
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 HP:0008936 Muscular hypotonia of the trunk "Muscular hypotonia (abnormally low muscle tone) affecting the musculature of the trunk." [HPO:curators]
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 HP:0008969 Leg muscle stiffness 
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 HP:0009771 Osteolytic defects of the phalanges of the hand "Dissolution or degeneration of bone tissue of the phalanges of the hand." [HPO:curators]
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 HP:0009830 Peripheral neuropathy "Peripheral neuropathy is a general term for any disorder of the peripheral nervous system. The main clinical features used to classify peripheral neuropathy are distribution, type (mainly demyelinating versus mainly axonal), duration, and course." [HPO:curators]
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 HP:0010741 Edema of the lower limbs 
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 HP:0010864 Mental retardation, severe "Moderate mental retardation is defined as an intelligence quotient (IQ) in the range of 20-34." [HPO:probinson]
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 HP:0011448 Ankle clonus "Clonus is an involuntary tendon reflex that causes repeated flexion and extension of the foot. Ankle clonus is tested by rapidly flexing the foot upward." [HPO:probinson]
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 HP:0011800 Midface retrusion "Posterior positions and/or vertical shortening of the infraorbital and perialar regions, or increased concavity of the face and/or reduced nasolabial angle." [DDD:jclayton-smith]
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 HP:0011968 Feeding difficulties "Impaired ability to eat related to problems gathering food and getting ready to suck, chew, or swallow it." [ISCA:eriggs]
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 HP:0012398 Peripheral edema "An abnormal accumulation of the accumulation of interstitial fluid in the soft tissues of the limbs." [HPO:probinson]
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 HP:0012407 Scissor gait "A form of gait abnormality characterized by hypertonia and flexion in the legs, hips and pelvis accompanied by extreme adduction leading to the knees and thighs hitting, or sometimes even crossing, in a scissors-like movement. The opposing muscles (abductors) become comparatively weak from lack of use." [HPO:probinson]
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 HP:0012469 Infantile spasms "Infantile spasms represent a subset of "epileptic spasms". Infantile Spasms are epileptic spasms starting in the first year of life (infancy)." [HPO:ihelbig]
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 HP:0100275 Diffuse cerebellar atrophy "Diffuse unlocalised atrophy affecting the cerebellum." [HPO:sdoelken]
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 HP:0100540 Palpebral edema 
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 HP:0100704 Cortical visual impairment "A form of loss of vision caused by damage to the visual cortex rather than a defect in the eye." [HPO:probinson]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
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