ENSG00000130707


Homo sapiens

Features
Gene ID: ENSG00000130707
  
Biological name :ASS1
  
Synonyms : argininosuccinate synthase 1 / ASS1 / P00966
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 9
Strand: 1
Band: q34.11
Gene start: 130444929
Gene end: 130501274
  
Corresponding Affymetrix probe sets: 207076_s_at (Human Genome U133 Plus 2.0 Array)   230406_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000361469
Ensembl peptide - ENSP00000253004
Ensembl peptide - ENSP00000394212
Ensembl peptide - ENSP00000397785
Ensembl peptide - ENSP00000361471
NCBI entrez gene - 445     See in Manteia.
OMIM - 603470
RefSeq - XM_017014729
RefSeq - NM_000050
RefSeq - NM_054012
RefSeq - XM_005272200
RefSeq - XM_011518705
RefSeq Peptide - NP_000041
RefSeq Peptide - NP_446464
swissprot - Q5T6L4
swissprot - Q5T6L5
swissprot - Q5T6L6
swissprot - P00966
Ensembl - ENSG00000130707
  
Related genetic diseases (OMIM): 215700 - Citrullinemia, 215700
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ASS1ENSGALG00000023689Gallus gallus
 Ass1ENSMUSG00000076441Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001518  Argininosuccinate synthase
 IPR014729  Rossmann-like alpha/beta/alpha sandwich fold
 IPR018223  Argininosuccinate synthase, conserved site
 IPR023434  Argininosuccinate synthase, type 1 subfamily
 IPR024074  Argininosuccinate synthetase, catalytic/multimerisation domain body


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000050 urea cycle TAS
 biological_processGO:0000052 citrulline metabolic process IMP
 biological_processGO:0000053 argininosuccinate metabolic process IMP
 biological_processGO:0001822 kidney development IEA
 biological_processGO:0001889 liver development IEA
 biological_processGO:0006526 arginine biosynthetic process IEA
 biological_processGO:0006531 aspartate metabolic process IMP
 biological_processGO:0006953 acute-phase response IEA
 biological_processGO:0007494 midgut development IEA
 biological_processGO:0007568 aging IEA
 biological_processGO:0007584 response to nutrient IEA
 biological_processGO:0007623 circadian rhythm IDA
 biological_processGO:0008652 cellular amino acid biosynthetic process IEA
 biological_processGO:0009636 response to toxic substance IEA
 biological_processGO:0010043 response to zinc ion IEA
 biological_processGO:0010046 response to mycotoxin IEA
 biological_processGO:0014075 response to amine IEA
 biological_processGO:0032355 response to estradiol IEA
 biological_processGO:0032496 response to lipopolysaccharide IEA
 biological_processGO:0042493 response to drug IEA
 biological_processGO:0043200 response to amino acid IEA
 biological_processGO:0043434 response to peptide hormone IEA
 biological_processGO:0045429 positive regulation of nitric oxide biosynthetic process IMP
 biological_processGO:0048545 response to steroid hormone IEA
 biological_processGO:0051384 response to glucocorticoid IEA
 biological_processGO:0060416 response to growth hormone IEA
 biological_processGO:0060539 diaphragm development IEA
 biological_processGO:0070542 response to fatty acid IEA
 biological_processGO:0071222 cellular response to lipopolysaccharide IEA
 biological_processGO:0071230 cellular response to amino acid stimulus IEA
 biological_processGO:0071242 cellular response to ammonium ion IEA
 biological_processGO:0071320 cellular response to cAMP IEA
 biological_processGO:0071346 cellular response to interferon-gamma IEA
 biological_processGO:0071356 cellular response to tumor necrosis factor IEA
 biological_processGO:0071377 cellular response to glucagon stimulus IEA
 biological_processGO:0071400 cellular response to oleic acid IEA
 biological_processGO:0071418 cellular response to amine stimulus IEA
 biological_processGO:0071499 cellular response to laminar fluid shear stress IMP
 biological_processGO:0071549 cellular response to dexamethasone stimulus IEA
 biological_processGO:1903038 negative regulation of leukocyte cell-cell adhesion IMP
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm TAS
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005741 mitochondrial outer membrane IEA
 cellular_componentGO:0005764 lysosome IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0043005 neuron projection IEA
 cellular_componentGO:0043025 neuronal cell body IEA
 cellular_componentGO:0043204 perikaryon IEA
 cellular_componentGO:0043209 myelin sheath IEA
 cellular_componentGO:0070062 extracellular exosome HDA
 cellular_componentGO:0070852 cell body fiber IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003723 RNA binding HDA
 molecular_functionGO:0004055 argininosuccinate synthase activity IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0015643 toxic substance binding IEA
 molecular_functionGO:0016597 amino acid binding IMP
 molecular_functionGO:0016874 ligase activity IEA
 molecular_functionGO:0042802 identical protein binding IPI


Pathways (from Reactome)
Pathway description
Urea cycle


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
Show

 HP:0000737 Irritability 
Show

 HP:0001249 Mental retardation 
Show

 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
Show

 HP:0001251 Ataxia "Ataxia is a nonspecific neurological sign and symptom consisting of gross lack of coordination of muscle movements. Ataxia is caused by dysfunction of one or more parts of the nervous system including the cerebellum, the sensory nervous system, the vestibular system, or the cerebral cortex." [HPO:curators]
Show

 HP:0001254 Lethargy 
Show

 HP:0001259 Coma 
Show

 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
Show

 HP:0001297 Stroke 
Show

 HP:0001394 Cirrhosis 
Show

 HP:0001508 Failure to thrive 
Show

 HP:0001950 Respiratory alkalosis 
Show

 HP:0001951 Episodic ammonia intoxication 
Show

 HP:0001987 Hyperammonemia 
Show

 HP:0002013 Vomiting 
Show

 HP:0002038 Protein avoidance 
Show

 HP:0002181 Cerebral edema "Abnormal accumulation of fluid in the brain." [HPO:curators]
Show

 HP:0002240 Hepatomegaly "An abnormal enlargment of the liver." [HPO:curators]
Show

 HP:0003217 High plasma glutamine 
Show

 HP:0003218 Oroticaciduria 
Show

 HP:0003623 Onset in neonatal period 
Show

 HP:0003812 Phenotypic variability 
Show

 HP:0005961 Arginine deficiency 
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000153406 NMRAL1 / Q9HBL8 / NmrA like redox sensor 1  / complex
 ENSG00000130707 ASS1 / P00966 / argininosuccinate synthase 1  / complex






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   


© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr