ENSG00000132669


Homo sapiens

Features
Gene ID: ENSG00000132669
  
Biological name :RIN2
  
Synonyms : Q8WYP3 / Ras and Rab interactor 2 / RIN2
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 20
Strand: 1
Band: p11.23
Gene start: 19886521
Gene end: 20002457
  
Corresponding Affymetrix probe sets: 209684_at (Human Genome U133 Plus 2.0 Array)   233811_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000391239
Ensembl peptide - ENSP00000255006
NCBI entrez gene - 54453     See in Manteia.
OMIM - 610222
RefSeq - XM_017027892
RefSeq - NM_001242581
RefSeq - NM_018993
RefSeq - XM_017027888
RefSeq - XM_017027889
RefSeq - XM_017027890
RefSeq - XM_017027891
RefSeq - XM_005260731
RefSeq - XM_005260733
RefSeq - XM_006723574
RefSeq - XM_006723575
RefSeq - XM_006723577
RefSeq - XM_011529255
RefSeq - XM_011529257
RefSeq - XM_011529258
RefSeq - XM_011529259
RefSeq - XM_017027887
RefSeq Peptide - NP_001229510
RefSeq Peptide - NP_061866
swissprot - Q8WYP3
swissprot - E7EPJ1
Ensembl - ENSG00000132669
  
Related genetic diseases (OMIM): 613075 - Macrocephaly, alopecia, cutis laxa, and scoliosis, 613075
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rin2ENSDARG00000074589Danio rerio
 si:ch211-85n16.4ENSDARG00000077040Danio rerio
 RIN2ENSGALG00000008457Gallus gallus
 Rin2ENSMUSG00000001768Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RIN3 / Q8TB24 / Ras and Rab interactor 3ENSG0000010059931
RIN1 / Q13671 / Ras and Rab interactor 1ENSG0000017479126
RINL / Q6ZS11 / Ras and Rab interactor likeENSG0000018799415


Protein motifs (from Interpro)
Interpro ID Name
 IPR000159  Ras-associating (RA) domain
 IPR000980  SH2 domain
 IPR003123  VPS9 domain
 IPR029071  Ubiquitin-like domain superfamily
 IPR035868  Ras and Rab interactor 2, SH2 domain
 IPR036860  SH2 domain superfamily
 IPR037191  VPS9 domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006897 endocytosis IEA
 biological_processGO:0007165 signal transduction IEA
 biological_processGO:0007264 small GTPase mediated signal transduction NAS
 biological_processGO:0043547 positive regulation of GTPase activity IEA
 biological_processGO:0050790 regulation of catalytic activity IEA
 biological_processGO:0065009 regulation of molecular function IEA
 cellular_componentGO:0005575 cellular_component ND
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol TAS
 molecular_functionGO:0005096 GTPase activator activity IEA
 molecular_functionGO:0017112 Rab guanyl-nucleotide exchange factor activity TAS
 molecular_functionGO:0030695 GTPase regulator activity NAS


Pathways (from Reactome)
Pathway description
RAB GEFs exchange GTP for GDP on RABs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000028 Cryptorchidism "Absence of one or both testes from the scrotum owing to failure of the testis or testes to descend through the inguinal canal to the testis." [HPO:curators]
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 HP:0000179 Prominent lower lip "Increased thickness of the lower lip, leading to a prominent appearance of the lower lip." [HPO:curators]
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 HP:0000212 Gingival hyperplasia 
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 HP:0000218 High palate "Height of the palate more than 2 SD above the mean (objective) or palatal height at the level of the first permanent molar more than twice the height of the teeth (subjective)." [pmid:19125428]
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 HP:0000280 Coarse facial features 
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 HP:0000343 Long philtrum 
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 HP:0000494 Downward slanting palpebral fissures 
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 HP:0000535 Sparse eyebrows 
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 HP:0000766 Abnormality of the sternum 
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 HP:0000815 Hypergonadotropic hypogonadism "Reduced function of the gonads (testes in males or ovaries in females) associated with excess pituitary gonadotropin secretion and resulting in delayed sexual development and growth delay." [HPO:curators]
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 HP:0000939 Osteoporosis "Osteoporosis is a systemic skeletal disease characterized by low bone density and microarchitectural deterioration of bone tissue with a consequent increase in bone fragility. According to the WHO, osteoporosis is characterized by a value of BMD 2.5 standard deviations or more below the young adult mean." [HPO:curators]
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 HP:0000954 Transverse palmar creases "The presence of a single palmar crease (instead of the two palmar creases that are typically present)." [HPO:curators]
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 HP:0000973 Cutis laxa 
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 HP:0000974 Hyperextensible skin 
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 HP:0000978 Ecchymoses 
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 HP:0001007 Hirsutism "Abnormally increased hair growth." [HPO:curators]
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 HP:0001156 Brachydactyly 
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 HP:0001252 Muscular hypotonia "Muscular hypotonia is an abnormally low muscle tone (the amount of tension or resistance to movement in a muscle), often involving reduced muscle strength. Hypotonia is characterized by a diminished resistance to passive stretching." [HPO:curators]
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 HP:0001382 Joint hypermobility "The ability of a joint to move beyond its normal range of motion." [HPO:curators]
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 HP:0001537 Umbilical hernia "Protrusion of abdominal contents through a defect in the abdominal wall musculature around the umbilicus. Skin and subcutaneous tissue overlie the defect." [HPO:curators]
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 HP:0001582 Loose, redundant skin 
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 HP:0001596 Alopecia "Loss of hair from the head or body." [HPO:curators]
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 HP:0001620 High pitched voice 
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 HP:0001763 Pes planus "A condition in which the arch of the foot is flat, with the entire sole of the foot being in near-complete contact with the ground." [HPO:curators]
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 HP:0002110 Bronchiectasis 
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 HP:0002209 Sparse scalp hair "Sparseness of the `head hair` (FMA:54241)." [HPO:probinson]
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 HP:0002650 Scoliosis "The presence of an abnormal lateral curvature of the spine." [HPO:curators]
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 HP:0002659 Increased susceptibility to fractures "An abnormally increased tendency to fractures of bones caused by an abnormal reduction in bone strength that is generally associated with an increased risk of fracture." [HPO:sdoelken]
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 HP:0003010 Prolonged bleeding time 
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 HP:0004322 Decreased body height "A height below that which is expected according to age and gender norms. Although there is no universally accepted definition of short stature, many refer to "short stature" as height more than 2 standard deviations below the mean for age and gender (or below the 3rd percentile for age and gender dependent norms)." [HPO:curators]
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 HP:0004325 Decreased body weight 
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 HP:0004942 Aortic aneurysms 
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 HP:0008064 Ichthyosiform abnormality of the skin 
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 HP:0008070 Sparse hair 
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 HP:0008209 Premature ovarian failure 
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 HP:0008661 Urethral stenosis 
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 HP:0011003 Severe Myopia 
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 HP:0011232 Infra-orbital fold "Elevated ridge(s) of skin starting well below the medial aspect of the lower lid that curves gradually upward toward and/or across the nasal bridge." [pmid:19125427]
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 HP:0012472 Eclabion "A turning outward of the lip or lips, that is, eversion of the lips." [HPO:probinson]
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 HP:0012724 Upper eyelid edema "Edema in the region of the upper eyelid." [HPO:probinson]
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 HP:0040079 Irregular dentition 
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 HP:0100540 Palpebral edema 
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 HP:0100543 Cognitive impairment "Abnormality in the process of thought including the ability to process information." [HPO:sdoelken]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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