ENSG00000138303


Homo sapiens

Features
Gene ID: ENSG00000138303
  
Biological name :ASCC1
  
Synonyms : activating signal cointegrator 1 complex subunit 1 / ASCC1 / Q8N9N2
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 10
Strand: -1
Band: q22.1
Gene start: 72096032
Gene end: 72217134
  
Corresponding Affymetrix probe sets: 1554627_a_at (Human Genome U133 Plus 2.0 Array)   219336_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000431419
Ensembl peptide - ENSP00000431299
Ensembl peptide - ENSP00000431573
Ensembl peptide - ENSP00000436409
Ensembl peptide - ENSP00000436098
Ensembl peptide - ENSP00000435191
Ensembl peptide - ENSP00000435147
Ensembl peptide - ENSP00000434468
Ensembl peptide - ENSP00000432418
Ensembl peptide - ENSP00000431746
Ensembl peptide - ENSP00000320461
Ensembl peptide - ENSP00000320810
Ensembl peptide - ENSP00000339404
Ensembl peptide - ENSP00000378373
Ensembl peptide - ENSP00000378377
Ensembl peptide - ENSP00000431255
NCBI entrez gene - 51008     See in Manteia.
OMIM - 614215
RefSeq - XM_017016303
RefSeq - NM_001198800
RefSeq - XM_006717873
RefSeq - XM_011539841
RefSeq - XM_011539842
RefSeq - XM_017016291
RefSeq - XM_017016292
RefSeq - XM_017016293
RefSeq - XM_017016294
RefSeq - XM_017016295
RefSeq - XM_017016296
RefSeq - XM_017016297
RefSeq - XM_017016298
RefSeq - XM_017016299
RefSeq - XM_017016300
RefSeq - XM_017016301
RefSeq - XM_017016302
RefSeq - NM_001198798
RefSeq - NM_001198799
RefSeq Peptide - NP_001185729
RefSeq Peptide - NP_001185727
RefSeq Peptide - NP_001185728
swissprot - E9PM82
swissprot - E9PL92
swissprot - E9PKM6
swissprot - E9PJM2
swissprot - H0YCB3
swissprot - E9PR40
swissprot - H0YE79
swissprot - H0YER2
swissprot - Q8N9N2
swissprot - A0A024QZM0
swissprot - H0YE76
swissprot - E9PQZ6
swissprot - E9PQ44
Ensembl - ENSG00000138303
  
Related genetic diseases (OMIM): 614266 - Barrett esophagus/esophageal adenocarcinoma, 614266
  616867 - ?Spinal muscular atrophy with congenital bone fractures 2, 616867
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ascc1ENSDARG00000077760Danio rerio
 ASCC1ENSGALG00000026019Gallus gallus
 Ascc1ENSMUSG00000044475Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR004087  K Homology domain
 IPR004088  K Homology domain, type 1
 IPR009097  Cyclic phosphodiesterase
 IPR009210  Activating signal cointegrator 1 complex subunit 1
 IPR019510  Protein kinase A anchor protein, nuclear localisation signal domain
 IPR036612  K Homology domain, type 1 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006307 DNA dealkylation involved in DNA repair TAS
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IDA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0005667 transcription factor complex IDA
 cellular_componentGO:0031594 neuromuscular junction IMP
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
ALKBH3 mediated reversal of alkylation damage


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001284 Areflexia 
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 HP:0001290 Generalized hypotonia "Generalized muscular hypotonia (abnormally low muscle tone)." [HPO:curators]
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 HP:0001324 Muscle weakness "Reduced strength of muscles." [HPO:curators]
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 HP:0001428 Somatic mutation 
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 HP:0001558 Decreased fetal movement "An abnormal reduction in quantity or strength of fetal movements." [HPO:curators]
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 HP:0001561 Polyhydramnios 
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 HP:0001622 Premature birth 
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 HP:0001643 Patent ductus arteriosus 
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 HP:0001655 Patent foramen ovale 
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 HP:0002015 Dysphagia "Difficulty in swallowing." [HPO:curators]
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 HP:0002089 Pulmonary hypoplasia 
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 HP:0002536 Abnormal cortical gyration "An abnormality of the gyri (i.e., the ridges) of the cerebral cortex of the brain." [HPO:curators]
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 HP:0002643 Neonatal respiratory distress 
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 HP:0002804 Arthrogryposis multiplex congenita 
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 HP:0002878 Early respiratory failure 
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 HP:0003447 Axonal loss 
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 HP:0003477 Axonal neuropathy 
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 HP:0003557 Increased variability in muscle fiber size "An abnormally high degree of muscle fiber size variation. This phenotypic feature can be observed upon muscle biopsy." [HPO:curators]
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 HP:0003577 Onset at birth 
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 HP:0005855 Multiple prenatal fractures "The presence of bone fractures in the prenatal period that are diagnosed at birth or before." [HPO:curators]
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 HP:0006829 Severe muscular hypotonia "A severe degree of muscular hypotonia characterized by markedly reduced muscle tone." [HPO:curators]
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 HP:0007269 Spinal muscular atrophy "Muscular weakness and atrophy related to loss of the motor neurons of the spinal cord and brainstem." [HPO:curators]
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 HP:0011459 Esophageal carcinoma "The presence of a `carcinoma` (MPATH:549) of the `esophagus` (FMA:7131)." [DDD:hfirth]
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 HP:0100580 Barrett esophagus "An abnormal change (metaplasia) in the cells of the inferior portion of the esophagus. The normal squamous epithelium lining of the esophagus is replaced by metaplastic columnar epithelium. Columnar epithelium refers to a cell type that is typically found in more distal parts of the gastrointestinal system." [HPO:sdoelken]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000166199 ALKBH3 / Q96Q83 / alkB homolog 3, alpha-ketoglutaratedependent dioxygenase  / complex
 ENSG00000112249 ASCC3 / Q8N3C0 / activating signal cointegrator 1 complex subunit 3  / complex
 ENSG00000100325 ASCC2 / Q9H1I8 / activating signal cointegrator 1 complex subunit 2  / complex






 

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